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Liver Injury: The MCD diet is designed to induce liver injury, characterized by the accumulation of fat in the liver (hepatic steatosis), inflammation (steatohepatitis), and eventually fibrosis and cirrhosis. By depriving the liver of methionine and choline, the MCD diet disrupts lipid metabolism, leading to the development of NAFLD-like symptoms in animal models.
Non-Alcoholic Fatty Liver Disease (NAFLD) Research: The MCD diet is commonly used in preclinical research to model NAFLD, a condition characterized by the accumulation of fat in the liver in the absence of significant alcohol consumption. NAFLD is a prevalent liver disorder associated with obesity, insulin resistance, and metabolic syndrome.
Liver Fibrosis and Cirrhosis: Prolonged exposure to the MCD diet can lead to the progression of liver injury to more advanced stages, including fibrosis and cirrhosis. These conditions involve the excessive deposition of scar tissue in the liver, impairing liver function and potentially leading to liver failure and hepatocellular carcinoma (liver cancer).
Oxidative Stress and Inflammation: The MCD diet-induced liver injury is associated with increased oxidative stress and inflammation within the liver. The depletion of methionine and choline disrupts antioxidant defenses and promotes the production of reactive oxygen species (ROS) and pro-inflammatory cytokines, contributing to tissue damage and disease progression.
Metabolic Dysfunction: Methionine and choline are essential nutrients involved in various metabolic pathways, including lipid metabolism, one-carbon metabolism, and the synthesis of phospholipids and neurotransmitters. Deprivation of these nutrients on the MCD diet can disrupt metabolic homeostasis and contribute to systemic metabolic dysfunction.
Experimental Tool for Liver Disease Research: Despite its limitations and relevance primarily to animal models, the MCD diet serves as a valuable experimental tool for studying the pathogenesis of NAFLD and liver fibrosis and evaluating potential therapeutic interventions for these conditions.
Rank | Probiotic | Impact |
---|---|---|
genus | Bifidobacterium | Reduces |
species | Bacteroides uniformis | Increases |
species | Bifidobacterium adolescentis | Reduces |
species | Bifidobacterium animalis | Reduces |
species | Bifidobacterium bifidum | Reduces |
species | Bifidobacterium breve | Reduces |
species | Bifidobacterium catenulatum | Reduces |
species | Bifidobacterium longum | Reduces |
species | Bifidobacterium pseudocatenulatum | Reduces |
species | Bifidobacterium pseudolongum | Reduces |
species | Phocaeicola coprocola | Increases |
We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.
π Direct Citations | πͺπΆ Indirect Citations | Taxonomy | Rank | Effect |
---|---|---|---|---|
0 | 1 | Bacteroidota/Chlorobiota group | clade | Decreases |
0 | 1 | Terrabacteria group | clade | Increases |
1 | 0 | Bacteroidia | class | Decreases |
1 | 0 | Christensenellaceae | family | Decreases |
1 | 0 | Coriobacteriaceae | family | Decreases |
1 | 0 | Enterobacteriaceae | family | Decreases |
1 | 0 | Eubacteriaceae | family | Decreases |
1 | 0 | Lactobacillaceae | family | Decreases |
1 | 0 | Rikenellaceae | family | Decreases |
0 | 1 | Peptostreptococcaceae | family | Decreases |
0 | 1 | Odoribacteraceae | family | Decreases |
0 | 1 | Comamonadaceae | family | Decreases |
0 | 1 | Coprobacillaceae | family | Decreases |
0 | 1 | Lachnospiraceae | family | Decreases |
0 | 1 | Sutterellaceae | family | Decreases |
0 | 1 | Barnesiellaceae | family | Decreases |
2 | 0 | Bifidobacteriaceae | family | Increases |
0 | 1 | Corynebacteriaceae | family | Increases |
1 | 0 | Actinomycetaceae | family | Increases |
1 | 0 | Bacteroidaceae | family | Increases |
1 | 0 | Oxalobacteraceae | family | Increases |
1 | 0 | Ruminococcaceae | family | Increases |
2 | 0 | Oscillospiraceae | family | Increases |
1 | 0 | Alistipes | genus | Decreases |
1 | 0 | Coprobacillus | genus | Decreases |
1 | 0 | Coprococcus | genus | Decreases |
1 | 0 | Delftia | genus | Decreases |
1 | 0 | Eubacterium | genus | Decreases |
1 | 0 | Intestinibacter | genus | Decreases |
1 | 0 | Roseburia | genus | Decreases |
1 | 0 | Sutterella | genus | Decreases |
1 | 1 | Bifidobacterium | genus | Decreases |
0 | 1 | Acetobacterium | genus | Decreases |
0 | 1 | Acetobacteroides | genus | Decreases |
0 | 1 | Alkalibacter | genus | Decreases |
0 | 1 | Alkalibaculum | genus | Decreases |
0 | 1 | Aminicella | genus | Decreases |
0 | 1 | Anaerocella | genus | Decreases |
0 | 1 | Anaerofustis | genus | Decreases |
0 | 1 | Atlantibacter | genus | Decreases |
0 | 1 | Buttiauxella | genus | Decreases |
0 | 1 | Candidatus Ishikawella | genus | Decreases |
0 | 1 | Candidatus Moranella | genus | Decreases |
0 | 1 | Candidatus Phlomobacter | genus | Decreases |
0 | 1 | Candidatus Profftia | genus | Decreases |
0 | 1 | Candidatus Riesia | genus | Decreases |
0 | 1 | Candidatus Schneideria | genus | Decreases |
0 | 1 | Cedecea | genus | Decreases |
0 | 1 | Citrobacter | genus | Decreases |
0 | 1 | Collinsella | genus | Decreases |
0 | 1 | Coriobacterium | genus | Decreases |
0 | 1 | Cronobacter | genus | Decreases |
0 | 1 | Enorma | genus | Decreases |
0 | 1 | Enterobacter | genus | Decreases |
0 | 1 | Entomohabitans | genus | Decreases |
0 | 1 | Escherichia | genus | Decreases |
0 | 1 | Franconibacter | genus | Decreases |
0 | 1 | Gallalistipes | genus | Decreases |
0 | 1 | Gallibacter | genus | Decreases |
0 | 1 | Garciella | genus | Decreases |
0 | 1 | Intestinibacillus | genus | Decreases |
0 | 1 | Jejubacter | genus | Decreases |
0 | 1 | Kluyvera | genus | Decreases |
0 | 1 | Kosakonia | genus | Decreases |
0 | 1 | Leclercia | genus | Decreases |
0 | 1 | Lelliottia | genus | Decreases |
0 | 1 | Mangrovibacter | genus | Decreases |
0 | 1 | Metakosakonia | genus | Decreases |
0 | 1 | Millionella | genus | Decreases |
0 | 1 | Mucinivorans | genus | Decreases |
0 | 1 | Olegusella | genus | Decreases |
0 | 1 | Parvibacter | genus | Decreases |
0 | 1 | Phytobacter | genus | Decreases |
0 | 1 | Plesiomonas | genus | Decreases |
0 | 1 | Pluralibacter | genus | Decreases |
0 | 1 | Pseudescherichia | genus | Decreases |
0 | 1 | Pseudocitrobacter | genus | Decreases |
0 | 1 | Pseudoramibacter | genus | Decreases |
0 | 1 | Rikenella | genus | Decreases |
0 | 1 | Ruminofilibacter | genus | Decreases |
0 | 1 | Salmonella | genus | Decreases |
0 | 1 | Scandinavium | genus | Decreases |
0 | 1 | Senegalimassilia | genus | Decreases |
0 | 1 | Shigella | genus | Decreases |
0 | 1 | Shimwellia | genus | Decreases |
0 | 1 | Siccibacter | genus | Decreases |
0 | 1 | Superficieibacter | genus | Decreases |
0 | 1 | Tidjanibacter | genus | Decreases |
0 | 1 | Trabulsiella | genus | Decreases |
0 | 1 | Yokenella | genus | Decreases |
0 | 1 | Coprobacter | genus | Decreases |
0 | 2 | Aeriscardovia | genus | Increases |
0 | 2 | Alloscardovia | genus | Increases |
0 | 2 | Bombiscardovia | genus | Increases |
0 | 2 | Galliscardovia | genus | Increases |
0 | 2 | Gardnerella | genus | Increases |
0 | 2 | Neoscardovia | genus | Increases |
0 | 2 | Parascardovia | genus | Increases |
0 | 2 | Pseudoscardovia | genus | Increases |
0 | 2 | Scardovia | genus | Increases |
0 | 1 | Acutalibacter | genus | Increases |
0 | 1 | Drancourtella | genus | Increases |
0 | 1 | Harryflintia | genus | Increases |
0 | 1 | Massilimalia | genus | Increases |
0 | 1 | Mediterranea | genus | Increases |
0 | 1 | Neobittarella | genus | Increases |
0 | 1 | Phocaeicola | genus | Increases |
0 | 1 | Provencibacterium | genus | Increases |
0 | 1 | Acetanaerobacterium | genus | Increases |
0 | 1 | Acetivibrio | genus | Increases |
0 | 1 | Agathobaculum | genus | Increases |
0 | 1 | Anaerofilum | genus | Increases |
0 | 1 | Anaeromassilibacillus | genus | Increases |
0 | 1 | Anaerorhabdus | genus | Increases |
0 | 1 | Anaerotruncus | genus | Increases |
0 | 1 | Angelakisella | genus | Increases |
0 | 1 | Bittarella (ex Durand et al. 2017) | genus | Increases |
0 | 1 | Candidatus Soleaferrea | genus | Increases |
0 | 1 | Caproiciproducens | genus | Increases |
0 | 1 | Ethanoligenens | genus | Increases |
0 | 1 | Faecalibacterium | genus | Increases |
0 | 1 | Flavonifractor | genus | Increases |
0 | 1 | Fournierella | genus | Increases |
0 | 1 | Gemmiger | genus | Increases |
0 | 1 | Gorbachella | genus | Increases |
0 | 1 | Hydrogenoanaerobacterium | genus | Increases |
0 | 1 | Negativibacillus | genus | Increases |
0 | 1 | Neglectibacter | genus | Increases |
0 | 1 | Oscillospira | genus | Increases |
0 | 1 | Papillibacter | genus | Increases |
0 | 1 | Phocea | genus | Increases |
0 | 1 | Pseudoflavonifractor | genus | Increases |
0 | 1 | Ruminococcus | genus | Increases |
0 | 1 | Ruthenibacterium | genus | Increases |
0 | 1 | Sporobacter | genus | Increases |
0 | 1 | Subdoligranulum | genus | Increases |
1 | 0 | Bacteroides | genus | Increases |
0 | 1 | Coriobacteriaceae incertae sedis | no rank | Decreases |
0 | 1 | Enterobacteriaceae incertae sedis | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | environmental samples | no rank | Decreases |
0 | 1 | Eubacteriaceae incertae sedis | no rank | Decreases |
0 | 1 | Klebsiella/Raoultella group | no rank | Decreases |
0 | 1 | Rikenellaceae incertae sedis | no rank | Decreases |
0 | 1 | unclassified Alistipes | no rank | Decreases |
0 | 1 | unclassified Bifidobacterium | no rank | Decreases |
0 | 1 | unclassified Coprobacillus | no rank | Decreases |
0 | 1 | unclassified Coprococcus | no rank | Decreases |
0 | 1 | unclassified Coriobacteriaceae | no rank | Decreases |
0 | 1 | unclassified Delftia | no rank | Decreases |
0 | 1 | unclassified Enterobacteriaceae | no rank | Decreases |
0 | 1 | unclassified Eubacteriaceae | no rank | Decreases |
0 | 1 | unclassified Eubacterium (in: firmicutes) | no rank | Decreases |
0 | 1 | unclassified Rikenellaceae | no rank | Decreases |
0 | 1 | unclassified Roseburia | no rank | Decreases |
0 | 1 | unclassified Sutterella | no rank | Decreases |
0 | 2 | unclassified Bifidobacteriaceae (miscellaneous) | no rank | Increases |
0 | 1 | Bacteroidaceae incertae sedis | no rank | Increases |
0 | 1 | environmental samples | no rank | Increases |
0 | 1 | environmental samples | no rank | Increases |
0 | 1 | unclassified Bacteroidaceae | no rank | Increases |
0 | 1 | unclassified Bacteroides | no rank | Increases |
0 | 1 | Oscillospiraceae incertae sedis | no rank | Increases |
0 | 1 | environmental samples | norank | Increases |
0 | 1 | Enterobacterales | order | Decreases |
0 | 1 | Lactobacillales | order | Decreases |
0 | 1 | Coriobacteriales | order | Decreases |
0 | 1 | Bacteroidales | order | Increases |
0 | 2 | Bifidobacteriales | order | Increases |
0 | 1 | Actinomycetales | order | Increases |
0 | 1 | Burkholderiales | order | Increases |
0 | 2 | Eubacteriales | order | Increases |
1 | 0 | Actinomycetota | phylum | Decreases |
1 | 0 | Bacteroidota | phylum | Decreases |
0 | 1 | Spirochaetota | phylum | Increases |
1 | 0 | Bacillota | phylum | Increases |
0 | 1 | Bacteroides bouchesdurhonensis | QSV445 | Increases |
1 | 0 | Eubacterium coprostanoligenes | species | Decreases |
0 | 1 | Alistipes sp. 56_11 | species | Decreases |
0 | 1 | Alistipes sp. AL-1 | species | Decreases |
0 | 1 | Alistipes sp. cv1 | species | Decreases |
0 | 1 | Alistipes sp. DJF_B185 | species | Decreases |
0 | 1 | Alistipes sp. EBA6-25cl2 | species | Decreases |
0 | 1 | Alistipes sp. HGB5 | species | Decreases |
0 | 1 | Alistipes sp. NML05A004 | species | Decreases |
0 | 1 | Alistipes sp. RMA 9912 | species | Decreases |
0 | 1 | Alistipes sp. S457 | species | Decreases |
0 | 1 | Bifidobacterium sp. | species | Decreases |
0 | 1 | Bifidobacterium sp. 113 | species | Decreases |
0 | 1 | Bifidobacterium sp. 120 | species | Decreases |
0 | 1 | Bifidobacterium sp. 138 | species | Decreases |
0 | 1 | Bifidobacterium sp. 65947 | species | Decreases |
0 | 1 | Bifidobacterium sp. h12 | species | Decreases |
0 | 1 | Bifidobacterium sp. JCM 6439 | species | Decreases |
0 | 1 | Bifidobacterium sp. M45 | species | Decreases |
0 | 1 | Bifidobacterium sp. MC_8 | species | Decreases |
0 | 1 | Bifidobacterium sp. MSTE12 | species | Decreases |
0 | 1 | Bifidobacterium sp. MSX5B | species | Decreases |
0 | 1 | Bifidobacterium sp. PL1 | species | Decreases |
0 | 1 | Eubacterium sp. | species | Decreases |
0 | 1 | Eubacterium sp. 3_1_31 | species | Decreases |
0 | 1 | Eubacterium sp. ARC-2 | species | Decreases |
0 | 1 | Eubacterium sp. ER2 | species | Decreases |
0 | 1 | Eubacterium sp. oral strain A35MT | species | Decreases |
0 | 1 | Eubacterium sp. SA11 | species | Decreases |
0 | 1 | Lachnospira eligens | species | Decreases |
0 | 1 | [Eubacterium] cellulosolvens | species | Decreases |
0 | 1 | Alistipes communis | species | Decreases |
0 | 1 | Alistipes dispar | species | Decreases |
0 | 1 | Alistipes finegoldii | species | Decreases |
0 | 1 | Alistipes hominis | species | Decreases |
0 | 1 | Alistipes ihumii | species | Decreases |
0 | 1 | Alistipes indistinctus | species | Decreases |
0 | 1 | Alistipes inops | species | Decreases |
0 | 1 | Alistipes massiliensis | species | Decreases |
0 | 1 | Alistipes megaguti | species | Decreases |
0 | 1 | Alistipes montrealensis | species | Decreases |
0 | 1 | Alistipes obesi | species | Decreases |
0 | 1 | Alistipes onderdonkii | species | Decreases |
0 | 1 | Alistipes provencensis | species | Decreases |
0 | 1 | Alistipes putredinis | species | Decreases |
0 | 1 | Alistipes senegalensis | species | Decreases |
0 | 1 | Alistipes shahii | species | Decreases |
0 | 1 | Alistipes sp. | species | Decreases |
0 | 1 | Alistipes sp. AF14-19 | species | Decreases |
0 | 1 | Alistipes timonensis | species | Decreases |
0 | 1 | Bifidobacterium actinocoloniiforme | species | Decreases |
0 | 1 | Bifidobacterium adolescentis | species | Decreases |
0 | 1 | Bifidobacterium aesculapii | species | Decreases |
0 | 1 | Bifidobacterium angulatum | species | Decreases |
0 | 1 | Bifidobacterium animalis | species | Decreases |
0 | 1 | Bifidobacterium asteroides | species | Decreases |
0 | 1 | Bifidobacterium avesanii | species | Decreases |
0 | 1 | Bifidobacterium biavatii | species | Decreases |
0 | 1 | Bifidobacterium bifidum | species | Decreases |
0 | 1 | Bifidobacterium bohemicum | species | Decreases |
0 | 1 | Bifidobacterium bombi | species | Decreases |
0 | 1 | Bifidobacterium boum | species | Decreases |
0 | 1 | Bifidobacterium breve | species | Decreases |
0 | 1 | Bifidobacterium callitrichidarum | species | Decreases |
0 | 1 | Bifidobacterium callitrichos | species | Decreases |
0 | 1 | Bifidobacterium catenulatum | species | Decreases |
0 | 1 | Bifidobacterium choerinum | species | Decreases |
0 | 1 | Bifidobacterium commune | species | Decreases |
0 | 1 | Bifidobacterium coryneforme | species | Decreases |
0 | 1 | Bifidobacterium cuniculi | species | Decreases |
0 | 1 | Bifidobacterium dentium | species | Decreases |
0 | 1 | Bifidobacterium eulemuris | species | Decreases |
0 | 1 | Bifidobacterium faecale | species | Decreases |
0 | 1 | Bifidobacterium gallicum | species | Decreases |
0 | 1 | Bifidobacterium imperatoris | species | Decreases |
0 | 1 | Bifidobacterium indicum | species | Decreases |
0 | 1 | Bifidobacterium lemurum | species | Decreases |
0 | 1 | Bifidobacterium longum | species | Decreases |
0 | 1 | Bifidobacterium magnum | species | Decreases |
0 | 1 | Bifidobacterium merycicum | species | Decreases |
0 | 1 | Bifidobacterium minimum | species | Decreases |
0 | 1 | Bifidobacterium mongoliense | species | Decreases |
0 | 1 | Bifidobacterium moukalabense | species | Decreases |
0 | 1 | Bifidobacterium myosotis | species | Decreases |
0 | 1 | Bifidobacterium porcinum | species | Decreases |
0 | 1 | Bifidobacterium pseudocatenulatum | species | Decreases |
0 | 1 | Bifidobacterium pseudolongum | species | Decreases |
0 | 1 | Bifidobacterium psychraerophilum | species | Decreases |
0 | 1 | Bifidobacterium pullorum | species | Decreases |
0 | 1 | Bifidobacterium reuteri | species | Decreases |
0 | 1 | Bifidobacterium ruminantium | species | Decreases |
0 | 1 | Bifidobacterium saguini | species | Decreases |
0 | 1 | Bifidobacterium scardovii | species | Decreases |
0 | 1 | Bifidobacterium simiae | species | Decreases |
0 | 1 | Bifidobacterium sp. group II-3 | species | Decreases |
0 | 1 | Bifidobacterium sp. N5G01 | species | Decreases |
0 | 1 | Bifidobacterium stellenboschense | species | Decreases |
0 | 1 | Bifidobacterium stercoris | species | Decreases |
0 | 1 | Bifidobacterium subtile | species | Decreases |
0 | 1 | Bifidobacterium thermacidophilum | species | Decreases |
0 | 1 | Bifidobacterium thermophilum | species | Decreases |
0 | 1 | Bifidobacterium tissieri | species | Decreases |
0 | 1 | Bifidobacterium tsurumiense | species | Decreases |
0 | 1 | Candidatus Alistipes avistercoris | species | Decreases |
0 | 1 | Candidatus Alistipes cottocaccae | species | Decreases |
0 | 1 | Candidatus Alistipes excrementavium | species | Decreases |
0 | 1 | Candidatus Alistipes excrementigallinarum | species | Decreases |
0 | 1 | Candidatus Alistipes excrementipullorum | species | Decreases |
0 | 1 | Candidatus Alistipes faecigallinarum | species | Decreases |
0 | 1 | Candidatus Alistipes intestinigallinarum | species | Decreases |
0 | 1 | Candidatus Alistipes merdavium | species | Decreases |
0 | 1 | Candidatus Alistipes merdipullorum | species | Decreases |
0 | 1 | Candidatus Alistipes pullicola | species | Decreases |
0 | 1 | Candidatus Alistipes pullistercoris | species | Decreases |
0 | 1 | Candidatus Alistipes stercorigallinarum | species | Decreases |
0 | 1 | Candidatus Alistipes stercoripullorum | species | Decreases |
0 | 1 | Candidatus Eubacterium faecale | species | Decreases |
0 | 1 | Candidatus Eubacterium faecavium | species | Decreases |
0 | 1 | Candidatus Eubacterium faecipullorum | species | Decreases |
0 | 1 | Coprobacillus cateniformis | species | Decreases |
0 | 1 | Coprobacillus sp. D6 | species | Decreases |
0 | 1 | Coprococcus catus | species | Decreases |
0 | 1 | Coprococcus comes | species | Decreases |
0 | 1 | Coprococcus eutactus | species | Decreases |
0 | 1 | Coprococcus hominis (ex Arizal et al. 2022) | species | Decreases |
0 | 1 | Coprococcus phoceensis | species | Decreases |
0 | 1 | Delftia acidovorans | species | Decreases |
0 | 1 | Delftia deserti | species | Decreases |
0 | 1 | Delftia lacustris | species | Decreases |
0 | 1 | Delftia tsuruhatensis | species | Decreases |
0 | 1 | Eubacterium barkeri | species | Decreases |
0 | 1 | Eubacterium callanderi | species | Decreases |
0 | 1 | Eubacterium limosum | species | Decreases |
0 | 1 | Eubacterium maltosivorans | species | Decreases |
0 | 1 | Eubacterium multiforme | species | Decreases |
0 | 1 | Eubacterium oxidoreducens | species | Decreases |
0 | 1 | Eubacterium plexicaudatum | species | Decreases |
0 | 1 | Eubacterium pyruvativorans | species | Decreases |
0 | 1 | Eubacterium ramulus | species | Decreases |
0 | 1 | Eubacterium rangiferina | species | Decreases |
0 | 1 | Eubacterium ruminantium | species | Decreases |
0 | 1 | Eubacterium segne | species | Decreases |
0 | 1 | Eubacterium sp. AM49-13BH | species | Decreases |
0 | 1 | Eubacterium uniforme | species | Decreases |
0 | 1 | Eubacterium ventriosum | species | Decreases |
0 | 1 | Eubacterium xylanophilum | species | Decreases |
0 | 1 | Roseburia cecicola | species | Decreases |
0 | 1 | Roseburia difficilis | species | Decreases |
0 | 1 | Roseburia faecis | species | Decreases |
0 | 1 | Roseburia hominis | species | Decreases |
0 | 1 | Roseburia intestinalis | species | Decreases |
0 | 1 | Roseburia inulinivorans | species | Decreases |
0 | 1 | Roseburia lenta | species | Decreases |
0 | 1 | Roseburia porci | species | Decreases |
0 | 1 | Roseburia rectibacter | species | Decreases |
0 | 1 | Roseburia yibonii | species | Decreases |
0 | 1 | Roseburia zhanii | species | Decreases |
0 | 1 | Sutterella faecalis | species | Decreases |
0 | 1 | Sutterella massiliensis | species | Decreases |
0 | 1 | Sutterella megalosphaeroides | species | Decreases |
0 | 1 | Sutterella parvirubra | species | Decreases |
0 | 1 | Sutterella sanguinus | species | Decreases |
0 | 1 | Sutterella seckii | species | Decreases |
0 | 1 | Sutterella stercoricanis | species | Decreases |
0 | 1 | Sutterella wadsworthensis | species | Decreases |
0 | 1 | Bacteroides acidifaciens | species | Increases |
0 | 1 | Bacteroides caccae | species | Increases |
0 | 1 | Bacteroides caecigallinarum | species | Increases |
0 | 1 | Bacteroides caecimuri | species | Increases |
0 | 1 | Bacteroides caecimuris | species | Increases |
0 | 1 | Bacteroides cellulosilyticus | species | Increases |
0 | 1 | Bacteroides chinchillae | species | Increases |
0 | 1 | Bacteroides clarus | species | Increases |
0 | 1 | Bacteroides congonensis | species | Increases |
0 | 1 | Bacteroides coprosuis | species | Increases |
0 | 1 | Bacteroides cutis | species | Increases |
0 | 1 | Bacteroides denticanum | species | Increases |
0 | 1 | Bacteroides difficilis | species | Increases |
0 | 1 | Bacteroides eggerthii | species | Increases |
0 | 1 | Bacteroides faecalis | species | Increases |
0 | 1 | Bacteroides faecichinchillae | species | Increases |
0 | 1 | Bacteroides faecis | species | Increases |
0 | 1 | Bacteroides faecium | species | Increases |
0 | 1 | Bacteroides finegoldii | species | Increases |
0 | 1 | Bacteroides fluxus | species | Increases |
0 | 1 | Bacteroides fragilis | species | Increases |
0 | 1 | Bacteroides galacturonicus | species | Increases |
0 | 1 | Bacteroides gallinaceum | species | Increases |
0 | 1 | Bacteroides gallinarum | species | Increases |
0 | 1 | Bacteroides graminisolvens | species | Increases |
0 | 1 | Bacteroides helcogenes | species | Increases |
0 | 1 | Bacteroides heparinolyticus | species | Increases |
0 | 1 | Bacteroides humanifaecis | species | Increases |
0 | 1 | Bacteroides ihuae | species | Increases |
0 | 1 | Bacteroides ilei | species | Increases |
0 | 1 | Bacteroides intestinalis | species | Increases |
0 | 1 | Bacteroides koreensis | species | Increases |
0 | 1 | Bacteroides kribbi | species | Increases |
0 | 1 | Bacteroides luhongzhouii | species | Increases |
0 | 1 | Bacteroides luti | species | Increases |
0 | 1 | Bacteroides mediterraneensis | species | Increases |
0 | 1 | Bacteroides muris (ex Fokt et al. 2023) | species | Increases |
0 | 1 | Bacteroides ndongoniae | species | Increases |
0 | 1 | Bacteroides nordii | species | Increases |
0 | 1 | Bacteroides oleiciplenus | species | Increases |
0 | 1 | Bacteroides ovatus | species | Increases |
0 | 1 | Bacteroides parvus | species | Increases |
0 | 1 | Bacteroides propionicifaciens | species | Increases |
0 | 1 | Bacteroides propionicigenes | species | Increases |
0 | 1 | Bacteroides pyogenes | species | Increases |
0 | 1 | Bacteroides reticulotermitis | species | Increases |
0 | 1 | Bacteroides rhinocerotis | species | Increases |
0 | 1 | Bacteroides rodentium | species | Increases |
0 | 1 | Bacteroides salyersiae | species | Increases |
0 | 1 | Bacteroides sp | species | Increases |
0 | 1 | Bacteroides sp. 1_1_30 | species | Increases |
0 | 1 | Bacteroides sp. 2_1_33B | species | Increases |
0 | 1 | Bacteroides sp. 3_1_19 | species | Increases |
0 | 1 | Bacteroides sp. C13EG172 | species | Increases |
0 | 1 | Bacteroides sp. D1 | species | Increases |
0 | 1 | Bacteroides sp. NMBE5 | species | Increases |
0 | 1 | Bacteroides stercorirosoris | species | Increases |
0 | 1 | Bacteroides stercoris | species | Increases |
0 | 1 | Bacteroides thetaiotaomicron | species | Increases |
0 | 1 | Bacteroides timonensis | species | Increases |
0 | 1 | Bacteroides uniformis | species | Increases |
0 | 1 | Bacteroides xylanisolvens | species | Increases |
0 | 1 | Bacteroides zhangwenhongii | species | Increases |
0 | 1 | Bacteroides zoogleoformans | species | Increases |
0 | 1 | Candidatus [Bacteroides] periocalifornicus | species | Increases |
0 | 1 | Candidatus Bacteroides intestinigallinarum | species | Increases |
0 | 1 | Bacteroides sp. | species | Increases |
0 | 1 | Bacteroides sp. 1_1_14 | species | Increases |
0 | 1 | Bacteroides sp. 14(A) | species | Increases |
0 | 1 | Bacteroides sp. 1B2 | species | Increases |
0 | 1 | Bacteroides sp. 2_1_22 | species | Increases |
0 | 1 | Bacteroides sp. 2_2_4 | species | Increases |
0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D11 | species | Increases |
0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D7 | species | Increases |
0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D8 | species | Increases |
0 | 1 | Bacteroides sp. 265d | species | Increases |
0 | 1 | Bacteroides sp. 3_1_23 | species | Increases |
0 | 1 | Bacteroides sp. 3_1_33FAA | species | Increases |
0 | 1 | Bacteroides sp. 3_1_40A | species | Increases |
0 | 1 | Bacteroides sp. 3_2_5 | species | Increases |
0 | 1 | Bacteroides sp. 314-4 | species | Increases |
0 | 1 | Bacteroides sp. 31SF15 | species | Increases |
0 | 1 | Bacteroides sp. 35AE37 | species | Increases |
0 | 1 | Bacteroides sp. 35BE34 | species | Increases |
0 | 1 | Bacteroides sp. 35BE35 | species | Increases |
0 | 1 | Bacteroides sp. 4_1_36 | species | Increases |
0 | 1 | Bacteroides sp. 4_3_47FAA | species | Increases |
0 | 1 | Bacteroides sp. 4072 | species | Increases |
0 | 1 | Bacteroides sp. 6-8 | species | Increases |
0 | 1 | Bacteroides sp. 7853 | species | Increases |
0 | 1 | Bacteroides sp. 9_1_42FAA | species | Increases |
0 | 1 | Bacteroides sp. A1C1 | species | Increases |
0 | 1 | Bacteroides sp. AR20 | species | Increases |
0 | 1 | Bacteroides sp. AR29 | species | Increases |
0 | 1 | Bacteroides sp. baku-33 | species | Increases |
0 | 1 | Bacteroides sp. BLBE-2 | species | Increases |
0 | 1 | Bacteroides sp. CB57 | species | Increases |
0 | 1 | Bacteroides sp. D2 | species | Increases |
0 | 1 | Bacteroides sp. D20 | species | Increases |
0 | 1 | Bacteroides sp. D22 | species | Increases |
0 | 1 | Bacteroides sp. D8 | species | Increases |
0 | 1 | Bacteroides sp. DJF_B097 | species | Increases |
0 | 1 | Bacteroides sp. dnLKV2 | species | Increases |
0 | 1 | Bacteroides sp. dnLKV3 | species | Increases |
0 | 1 | Bacteroides sp. dnLKV7 | species | Increases |
0 | 1 | Bacteroides sp. dnLKV9 | species | Increases |
0 | 1 | Bacteroides sp. EBA5-17 | species | Increases |
0 | 1 | Bacteroides sp. ES-27 | species | Increases |
0 | 1 | Bacteroides sp. HGA0134 | species | Increases |
0 | 1 | Bacteroides sp. HPS0048 | species | Increases |
0 | 1 | Bacteroides sp. J1511 | species | Increases |
0 | 1 | Bacteroides sp. MANG | species | Increases |
0 | 1 | Bacteroides sp. R6 | species | Increases |
0 | 1 | Bacteroides sp. S-17 | species | Increases |
0 | 1 | Bacteroides sp. S-18 | species | Increases |
0 | 1 | Bacteroides sp. SLC1-38 | species | Increases |
0 | 1 | Bacteroides sp. Smarlab 3301643 | species | Increases |
0 | 1 | Bacteroides sp. Smarlab 3302398 | species | Increases |
0 | 1 | Bacteroides sp. 'Smarlab BioMol-2301151' | species | Increases |
0 | 1 | Bacteroides sp. TP-5 | species | Increases |
0 | 1 | Bacteroides sp. UW | species | Increases |
0 | 1 | Bacteroides sp. WA1 | species | Increases |
0 | 1 | Bacteroides sp. WH302 | species | Increases |
0 | 1 | Bacteroides sp. WH305 | species | Increases |
0 | 1 | Bacteroides sp. XB12B | species | Increases |
0 | 1 | Bacteroides sp. XB44A | species | Increases |
0 | 1 | Lacrimispora xylanisolvens | species | Increases |
0 | 1 | Phocaeicola barnesiae | species | Increases |
0 | 1 | Phocaeicola coprocola | species | Increases |
0 | 1 | Phocaeicola coprophilus | species | Increases |
0 | 1 | Phocaeicola dorei | species | Increases |
0 | 1 | Phocaeicola massiliensis | species | Increases |
0 | 1 | Phocaeicola paurosaccharolyticus | species | Increases |
0 | 1 | Phocaeicola plebeius | species | Increases |
0 | 1 | Phocaeicola salanitronis | species | Increases |
0 | 1 | Phocaeicola sartorii | species | Increases |
0 | 1 | Phocaeicola vulgatus | species | Increases |
0 | 1 | Bifidobacterium pullorum subsp. gallinarum | subspecies | Decreases |
0 | 1 | Bifidobacterium pullorum subsp. saeculare | subspecies | Decreases |
A higher number indicates impact on more bacteria associated with the condition and confidence on the impact.
We have X bacteria high and Y low reported. We find that the modifier reduces some and increases other of these two groups. We just tally: X|reduces + Y|Increase = Positive X|increases + Y|decrease = Negative.
Benefit Ratio:
Numbers above 0 have increasing positive effect.
Numbers below 0 have increasing negative effect.
Condition | Positive Impact | Negative Impact | Benefit Ratio Impact |
---|---|---|---|
Abdominal Aortic Aneurysm | 0.2 | 0.2 | 0 |
Acne | 1.9 | 2.1 | -0.11 |
ADHD | 5.1 | 2.5 | 1.04 |
Age-Related Macular Degeneration and Glaucoma | 1.3 | 0.3 | 3.33 |
Allergic Rhinitis (Hay Fever) | 1 | 3 | -2 |
Allergies | 7.2 | 4.8 | 0.5 |
Allergy to milk products | 2.6 | 3.9 | -0.5 |
Alopecia (Hair Loss) | 1.1 | 1.6 | -0.45 |
Alzheimer's disease | 10 | 9.7 | 0.03 |
Amyotrophic lateral sclerosis (ALS) Motor Neuron | 3.9 | 2.7 | 0.44 |
Ankylosing spondylitis | 4.7 | 4.9 | -0.04 |
Anorexia Nervosa | 5.5 | 3 | 0.83 |
Antiphospholipid syndrome (APS) | 0.3 | 0.2 | 0.5 |
Asthma | 4.8 | 4.5 | 0.07 |
Atherosclerosis | 1.1 | 4.3 | -2.91 |
Atrial fibrillation | 2.9 | 3 | -0.03 |
Autism | 11 | 10.1 | 0.09 |
Autoimmune Disease | 1.5 | 1.7 | -0.13 |
Barrett esophagus cancer | 1.1 | 1.1 | |
benign prostatic hyperplasia | 1.8 | 1.8 | |
Biofilm | 0.2 | 0.2 | |
Bipolar Disorder | 4.9 | 4.3 | 0.14 |
Brain Trauma | 2.3 | 1.6 | 0.44 |
Breast Cancer | 0.4 | 0.7 | -0.75 |
Cancer (General) | 0.2 | 0.9 | -3.5 |
Carcinoma | 3.3 | 2.4 | 0.38 |
Celiac Disease | 5.6 | 6.9 | -0.23 |
Cerebral Palsy | 1.2 | 1.1 | 0.09 |
Chronic Fatigue Syndrome | 5 | 3.7 | 0.35 |
Chronic Kidney Disease | 3.8 | 3.9 | -0.03 |
Chronic Lyme | 1.1 | 0.5 | 1.2 |
Chronic Obstructive Pulmonary Disease (COPD) | 2.8 | 2.8 | 0 |
Chronic Urticaria (Hives) | 2.3 | 1 | 1.3 |
Coagulation / Micro clot triggering bacteria | 1.1 | 1.3 | -0.18 |
Cognitive Function | 3.9 | 6.6 | -0.69 |
Colorectal Cancer | 7.8 | 5.3 | 0.47 |
Constipation | 2.2 | 3.6 | -0.64 |
Coronary artery disease | 3.4 | 3.7 | -0.09 |
COVID-19 | 12.4 | 10.3 | 0.2 |
Crohn's Disease | 10.2 | 7.8 | 0.31 |
Cushing's Syndrome (hypercortisolism) | 0.8 | 0.8 | |
cystic fibrosis | 2.3 | 0.8 | 1.87 |
d-lactic acidosis (one form of brain fog) | 0.2 | 0.2 | |
deep vein thrombosis | 2.7 | 1.9 | 0.42 |
Denture Wearers Oral Shifts | 0.2 | 0.2 | |
Depression | 11.6 | 14.5 | -0.25 |
Dermatomyositis | 2.3 | 1.3 | 0.77 |
Eczema | 2.8 | 2.2 | 0.27 |
Endometriosis | 3.6 | 4.1 | -0.14 |
Eosinophilic Esophagitis | 1.8 | 1.8 | |
Epilepsy | 6.6 | 4.5 | 0.47 |
erectile dysfunction | 1.9 | 1.3 | 0.46 |
Fibromyalgia | 3 | 2 | 0.5 |
Functional constipation / chronic idiopathic constipation | 7.6 | 7.6 | 0 |
gallstone disease (gsd) | 1.1 | 2.8 | -1.55 |
Gastroesophageal reflux disease (Gerd) including Barrett's esophagus | 0.7 | 2.3 | -2.29 |
Generalized anxiety disorder | 1.9 | 3.9 | -1.05 |
giant cell arteritis | 0 | 0 | |
Glioblastoma | 1.6 | 0.2 | 7 |
Gout | 2.2 | 4.3 | -0.95 |
Graves' disease | 5.8 | 3.6 | 0.61 |
Gulf War Syndrome | 2.4 | 2.6 | -0.08 |
Halitosis | 0.5 | 0.8 | -0.6 |
Hashimoto's thyroiditis | 3.2 | 1.9 | 0.68 |
Heart Failure | 2.9 | 3.7 | -0.28 |
hemorrhagic stroke | 0.8 | 1 | -0.25 |
Hemorrhoidal disease, Hemorrhoids, Piles | 0.3 | 0.5 | -0.67 |
Hidradenitis Suppurativa | 0.6 | 0.6 | 0 |
High Histamine/low DAO | 1.7 | 0.8 | 1.13 |
hypercholesterolemia (High Cholesterol) | 0.7 | 0.2 | 2.5 |
hyperglycemia | 1.6 | 0.4 | 3 |
Hyperlipidemia (High Blood Fats) | 1.6 | 2.5 | -0.56 |
hypersomnia | 0.2 | 0.9 | -3.5 |
hypertension (High Blood Pressure | 6.9 | 5.7 | 0.21 |
Hypothyroidism | 1.1 | 2.8 | -1.55 |
Hypoxia | 0.2 | 1.3 | -5.5 |
IgA nephropathy (IgAN) | 3 | 3.5 | -0.17 |
Inflammatory Bowel Disease | 7.5 | 9.7 | -0.29 |
Insomnia | 7.1 | 2.8 | 1.54 |
Intelligence | 0.9 | 3.4 | -2.78 |
Intracranial aneurysms | 1 | 3.5 | -2.5 |
Irritable Bowel Syndrome | 7.6 | 9.2 | -0.21 |
ischemic stroke | 2.9 | 2.7 | 0.07 |
Juvenile idiopathic arthritis | 2.1 | 2.1 | |
Liver Cirrhosis | 7.4 | 5.3 | 0.4 |
Long COVID | 13.3 | 13.9 | -0.05 |
Low bone mineral density | 1.3 | 2 | -0.54 |
Lung Cancer | 2 | 1.1 | 0.82 |
Lymphoma | 0.9 | 0.6 | 0.5 |
Mast Cell Issues / mastitis | 0.6 | 2.4 | -3 |
ME/CFS with IBS | 1.3 | 0.6 | 1.17 |
ME/CFS without IBS | 1.1 | 0.6 | 0.83 |
Menopause | 0.8 | 0.9 | -0.13 |
Metabolic Syndrome | 10.8 | 9.9 | 0.09 |
Mood Disorders | 13.1 | 14.2 | -0.08 |
Multiple Sclerosis | 6.1 | 8.5 | -0.39 |
Multiple system atrophy (MSA) | 1.1 | 0.3 | 2.67 |
myasthenia gravis | 0.7 | 1.5 | -1.14 |
neuropathic pain | 0.6 | 1.1 | -0.83 |
Neuropathy (all types) | 1.2 | 2.6 | -1.17 |
neuropsychiatric disorders (PANDAS, PANS) | 2.6 | 0.8 | 2.25 |
Nonalcoholic Fatty Liver Disease (nafld) Nonalcoholic | 7.7 | 6.4 | 0.2 |
NonCeliac Gluten Sensitivity | 2.3 | 3 | -0.3 |
Obesity | 11.9 | 12.1 | -0.02 |
obsessive-compulsive disorder | 3.8 | 3.4 | 0.12 |
Osteoarthritis | 2.9 | 2 | 0.45 |
Osteoporosis | 5 | 3.6 | 0.39 |
pancreatic cancer | 2.1 | 1.1 | 0.91 |
Parkinson's Disease | 10.5 | 8.8 | 0.19 |
Peanut Allergy | 1.2 | -1.2 | |
Polycystic ovary syndrome | 7.1 | 5.8 | 0.22 |
Postural orthostatic tachycardia syndrome | 0.5 | 0.8 | -0.6 |
Premenstrual dysphoric disorder | 0.3 | 1 | -2.33 |
primary biliary cholangitis | 3.1 | 0.5 | 5.2 |
Primary sclerosing cholangitis | 2.5 | 1.9 | 0.32 |
Psoriasis | 1.4 | 4.3 | -2.07 |
rheumatoid arthritis (RA),Spondyloarthritis (SpA) | 7.1 | 7 | 0.01 |
Rosacea | 2.9 | 0.9 | 2.22 |
Schizophrenia | 8.9 | 7.8 | 0.14 |
scoliosis | 1.1 | 0.8 | 0.38 |
sensorineural hearing loss | 0.5 | 0.2 | 1.5 |
Sjögren syndrome | 2.9 | 2.3 | 0.26 |
Sleep Apnea | 2.4 | 4.6 | -0.92 |
Slow gastric motility / Gastroparesis | 0.7 | 1 | -0.43 |
Small Intestinal Bacterial Overgrowth (SIBO) | 2.3 | 2 | 0.15 |
Stress / posttraumatic stress disorder | 5 | 2.8 | 0.79 |
Systemic Lupus Erythematosus | 4.7 | 5.3 | -0.13 |
Tic Disorder | 0.7 | 2 | -1.86 |
Tourette syndrome | 1.2 | 1.2 | |
Type 1 Diabetes | 5.7 | 6.3 | -0.11 |
Type 2 Diabetes | 10.3 | 10.6 | -0.03 |
Ulcerative colitis | 10.3 | 8.1 | 0.27 |
Unhealthy Ageing | 2.2 | 5 | -1.27 |
Vitiligo | 0.5 | 1.7 | -2.4 |
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