AI Engines For more Details: Perplexity Kagi Labs You
Lower fiber content: Refined wheat breads contain significantly less dietary fiber compared to whole grain breads because the bran and germ, which are rich in fiber, are removed during the milling process. Dietary fiber is important for digestive health, promoting regular bowel movements, preventing constipation, and supporting the growth of beneficial gut bacteria.
Higher glycemic index: Refined wheat breads typically have a higher glycemic index (GI) compared to whole grain breads. Foods with a high GI can cause rapid spikes in blood sugar levels after consumption, which may lead to insulin resistance over time. Consistently high blood sugar levels and insulin resistance are risk factors for type 2 diabetes and metabolic syndrome.
Lower nutrient content: The removal of the bran and germ during the refining process also results in a loss of essential nutrients, including vitamins, minerals, and phytonutrients. Whole grain breads are typically higher in nutrients such as B vitamins (thiamine, riboflavin, niacin, folate), magnesium, zinc, and antioxidants compared to refined wheat breads.
Weight management: Some studies suggest that regular consumption of refined carbohydrates, including refined wheat breads, may be associated with weight gain and obesity. This is partly due to their lower fiber content and higher glycemic index, which can lead to increased hunger and overeating compared to whole grain foods.
Digestive issues: For some individuals, refined wheat breads may contribute to digestive issues such as bloating, gas, and discomfort, particularly if they have sensitivity to gluten or other components of wheat. People with celiac disease or non-celiac gluten sensitivity should avoid refined wheat breads and opt for gluten-free alternatives.
Inflammation: While more research is needed, some evidence suggests that diets high in refined carbohydrates, including refined wheat products, may contribute to chronic low-grade inflammation in the body. Chronic inflammation is linked to various health conditions, including cardiovascular disease, diabetes, and certain autoimmune disorders.
Lower satiety: Refined wheat breads may be less satiating than whole grain breads due to their lower fiber and nutrient content. As a result, individuals may feel less satisfied after consuming refined wheat products and may be more likely to consume additional calories from other sources.
| Rank | Probiotic | Impact |
|---|---|---|
| genus | Bifidobacterium | Increases |
| species | Akkermansia muciniphila | Increases |
| species | Bacteroides uniformis | Increases |
| species | Bifidobacterium adolescentis | Increases |
| species | Bifidobacterium animalis | Increases |
| species | Bifidobacterium bifidum | Increases |
| species | Bifidobacterium breve | Increases |
| species | Bifidobacterium catenulatum | Increases |
| species | Bifidobacterium longum | Increases |
| species | Bifidobacterium pseudocatenulatum | Increases |
| species | Bifidobacterium pseudolongum | Increases |
| species | Clostridium beijerinckii | Increases |
| species | Clostridium butyricum | Increases |
| species | Escherichia coli | Reduces |
| species | Faecalibacterium prausnitzii | Increases |
| species | Lactobacillus acidophilus | Increases |
| species | Lactobacillus crispatus | Increases |
| species | Lactobacillus gasseri | Increases |
| species | Lactobacillus helveticus | Increases |
| species | Lactobacillus jensenii | Increases |
| species | Lactobacillus johnsonii | Increases |
| species | Lactobacillus kefiranofaciens | Increases |
| species | Phocaeicola coprocola | Reduces |
| species | Propionibacterium freudenreichii | Increases |
| species | Streptococcus thermophilus | Increases |
| subspecies | Bifidobacterium longum subsp. infantis | Increases |
We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.
| π Direct Citations | πͺπΆ Indirect Citations | Taxonomy | Rank | Effect |
|---|---|---|---|---|
| 0 | 1 | Bacteroidota/Chlorobiota group | clade | Decreases |
| 0 | 1 | PVC group | clade | Decreases |
| 0 | 1 | Terrabacteria group | clade | Decreases |
| 0 | 1 | Verrucomicrobiia | class | Decreases |
| 0 | 1 | Bacteroidia | class | Decreases |
| 0 | 1 | Gammaproteobacteria | class | Decreases |
| 0 | 1 | Mollicutes | class | Decreases |
| 0 | 1 | Candidatus Izimaplasma | class | Decreases |
| 0 | 1 | Methylacidiphilae | class | Decreases |
| 0 | 1 | Saprospiria | class | Decreases |
| 0 | 1 | Spartobacteria | class | Decreases |
| 0 | 1 | Terrimicrobiia | class | Decreases |
| 0 | 1 | Zetaproteobacteria | class | Decreases |
| 0 | 1 | Acidithiobacillia | class | Decreases |
| 0 | 1 | Opitutia | class | Decreases |
| 0 | 1 | Alphaproteobacteria | class | Decreases |
| 0 | 1 | Chitinophagia | class | Decreases |
| 0 | 1 | Flavobacteriia | class | Decreases |
| 0 | 1 | Cytophagia | class | Decreases |
| 0 | 1 | Betaproteobacteria | class | Decreases |
| 0 | 1 | Hydrogenophilia | class | Decreases |
| 0 | 1 | Sphingobacteriia | class | Decreases |
| 0 | 1 | Tannerellaceae | family | Decreases |
| 0 | 1 | Acidaminococcaceae | family | Decreases |
| 1 | 2 | Prevotellaceae | family | Decreases |
| 0 | 1 | Porphyromonadaceae | family | Decreases |
| 0 | 2 | Akkermansiaceae | family | Decreases |
| 0 | 2 | Bifidobacteriaceae | family | Increases |
| 1 | 2 | Lachnospiraceae | family | Increases |
| 1 | 2 | Bacteroidaceae | family | Increases |
| 0 | 2 | Streptococcaceae | family | Increases |
| 0 | 1 | Fusobacteriaceae | family | Increases |
| 0 | 1 | Propionibacteriaceae | family | Increases |
| 0 | 1 | Veillonellaceae | family | Increases |
| 0 | 3 | Lactobacillaceae | family | Increases |
| 1 | 0 | Coriobacteriaceae | family | Increases |
| 0 | 3 | Oscillospiraceae | family | Increases |
| 0 | 3 | Eubacteriaceae | family | Increases |
| 1 | 1 | Clostridiaceae | family | Increases |
| 3 | 0 | Prevotella | genus | Decreases |
| 0 | 1 | Escherichia | genus | Decreases |
| 0 | 2 | Segatella | genus | Decreases |
| 1 | 0 | Acidaminococcus | genus | Decreases |
| 0 | 1 | Leyella | genus | Decreases |
| 0 | 1 | Paraprevotella | genus | Decreases |
| 0 | 1 | Alloprevotella | genus | Decreases |
| 0 | 1 | Anaerorhabdus | genus | Decreases |
| 0 | 1 | Hallella | genus | Decreases |
| 0 | 1 | Marseilla | genus | Decreases |
| 0 | 1 | Massiliprevotella | genus | Decreases |
| 0 | 1 | Mediterranea | genus | Decreases |
| 0 | 1 | Metaprevotella | genus | Decreases |
| 0 | 1 | Phocaeicola | genus | Decreases |
| 0 | 1 | Prevotellamassilia | genus | Decreases |
| 1 | 0 | Porphyromonas | genus | Decreases |
| 1 | 0 | Tannerella | genus | Decreases |
| 1 | 1 | Marvinbryantia | genus | Decreases |
| 1 | 1 | Tyzzerella | genus | Decreases |
| 0 | 1 | Hoylesella | genus | Decreases |
| 0 | 1 | Pseudoprevotella | genus | Decreases |
| 0 | 1 | Geosporobacter | genus | Increases |
| 0 | 1 | Candidatus Arthromitus | genus | Increases |
| 0 | 1 | Anaerotignum | genus | Increases |
| 0 | 1 | Butyricicoccus | genus | Increases |
| 0 | 1 | Anaeropeptidivorans | genus | Increases |
| 0 | 1 | Oceanirhabdus | genus | Increases |
| 0 | 1 | Paraclostridium | genus | Increases |
| 0 | 1 | Anaeromicropila | genus | Increases |
| 2 | 0 | Akkermansia | genus | Increases |
| 0 | 1 | Sarcina | genus | Increases |
| 0 | 1 | Chordicoccus | genus | Increases |
| 0 | 1 | Hathewaya | genus | Increases |
| 0 | 1 | Crassaminicella | genus | Increases |
| 0 | 1 | Proteiniclasticum | genus | Increases |
| 0 | 1 | Coriobacterium | genus | Increases |
| 0 | 1 | Alkaliphilus | genus | Increases |
| 0 | 1 | Anaerocolumna | genus | Increases |
| 0 | 1 | Enterocloster | genus | Increases |
| 0 | 1 | Pseudobutyrivibrio | genus | Increases |
| 0 | 1 | Sporofaciens | genus | Increases |
| 0 | 1 | Wujia | genus | Increases |
| 0 | 1 | Simiaoa | genus | Increases |
| 0 | 1 | Sellimonas | genus | Increases |
| 0 | 1 | Herbinix | genus | Increases |
| 0 | 1 | Caloramator | genus | Increases |
| 0 | 1 | Qiania | genus | Increases |
| 0 | 1 | Lacrimispora | genus | Increases |
| 0 | 1 | Novisyntrophococcus | genus | Increases |
| 0 | 1 | Lachnoanaerobaculum | genus | Increases |
| 0 | 1 | Butyrivibrio | genus | Increases |
| 0 | 1 | Hungatella | genus | Increases |
| 0 | 1 | Mediterraneibacter | genus | Increases |
| 0 | 1 | Lachnoclostridium | genus | Increases |
| 0 | 1 | Wansuia | genus | Increases |
| 0 | 1 | Acetatifactor | genus | Increases |
| 0 | 1 | Acetitomaculum | genus | Increases |
| 0 | 1 | Anaerobacter | genus | Increases |
| 0 | 1 | Anaerobium | genus | Increases |
| 0 | 1 | Anaerosacchariphilus | genus | Increases |
| 0 | 1 | Anaerosporobacter | genus | Increases |
| 0 | 1 | Anaerotaenia | genus | Increases |
| 0 | 1 | Anoxynatronum | genus | Increases |
| 0 | 1 | Anthropogastromicrobium | genus | Increases |
| 0 | 1 | Bariatricus | genus | Increases |
| 0 | 1 | Beduini | genus | Increases |
| 0 | 1 | Brassicibacter | genus | Increases |
| 0 | 1 | Brotaphodocola | genus | Increases |
| 0 | 1 | Butyribacter | genus | Increases |
| 0 | 1 | Caldisalinibacter | genus | Increases |
| 0 | 1 | Caminicella | genus | Increases |
| 0 | 1 | Candidatus Caccousia | genus | Increases |
| 0 | 1 | Candidatus Dwaynesavagella | genus | Increases |
| 0 | 1 | Candidatus Egerieicola | genus | Increases |
| 0 | 1 | Candidatus Epulonipiscium | genus | Increases |
| 0 | 1 | Candidatus Faeciplasma | genus | Increases |
| 0 | 1 | Candidatus Fimivicinus | genus | Increases |
| 0 | 1 | Candidatus Fimivivens | genus | Increases |
| 0 | 1 | Candidatus Galloscillospira | genus | Increases |
| 0 | 1 | Candidatus Limousia | genus | Increases |
| 0 | 1 | Candidatus Merdivicinus | genus | Increases |
| 0 | 1 | Candidatus Onthomonas | genus | Increases |
| 0 | 1 | Candidatus Pelethomonas | genus | Increases |
| 0 | 1 | Candidatus Scatavimonas | genus | Increases |
| 0 | 1 | Candidatus Scatovicinus | genus | Increases |
| 0 | 1 | Candidatus Scubalenecus | genus | Increases |
| 0 | 1 | Catenibacillus | genus | Increases |
| 0 | 1 | Catonella | genus | Increases |
| 0 | 1 | Claveliimonas | genus | Increases |
| 0 | 1 | Clostridiisalibacter | genus | Increases |
| 0 | 1 | Cuneatibacter | genus | Increases |
| 0 | 1 | Diplocloster | genus | Increases |
| 0 | 1 | Eisenbergiella | genus | Increases |
| 0 | 1 | Enorma | genus | Increases |
| 0 | 1 | Extibacter | genus | Increases |
| 0 | 1 | Faecalicatena | genus | Increases |
| 0 | 1 | Faecalimonas | genus | Increases |
| 0 | 1 | Falcatimonas | genus | Increases |
| 0 | 1 | Fervidicella | genus | Increases |
| 0 | 1 | Fonticella | genus | Increases |
| 0 | 1 | Frisingicoccus | genus | Increases |
| 0 | 1 | Fusicatenibacter | genus | Increases |
| 0 | 1 | Gallintestinimicrobium | genus | Increases |
| 0 | 1 | Gluceribacter | genus | Increases |
| 0 | 1 | Hespellia | genus | Increases |
| 0 | 1 | Hominifimenecus | genus | Increases |
| 0 | 1 | Hominisplanchenecus | genus | Increases |
| 0 | 1 | Hoministercoradaptatus | genus | Increases |
| 0 | 1 | Hominiventricola | genus | Increases |
| 0 | 1 | Jingyaoa | genus | Increases |
| 0 | 1 | Johnsonella | genus | Increases |
| 0 | 1 | Jutongia | genus | Increases |
| 0 | 1 | Kineothrix | genus | Increases |
| 0 | 1 | Lachnobacterium | genus | Increases |
| 0 | 1 | Lachnotalea | genus | Increases |
| 0 | 1 | Lactonifactor | genus | Increases |
| 0 | 1 | Lientehia | genus | Increases |
| 0 | 1 | Lutispora | genus | Increases |
| 0 | 1 | Luxibacter | genus | Increases |
| 0 | 1 | Maledivibacter | genus | Increases |
| 0 | 1 | Massilioclostridium | genus | Increases |
| 0 | 1 | Merdimonas | genus | Increases |
| 0 | 1 | Mobilitalea | genus | Increases |
| 0 | 1 | Mordavella | genus | Increases |
| 0 | 1 | Moryella | genus | Increases |
| 0 | 1 | Muricomes | genus | Increases |
| 0 | 1 | Murimonas | genus | Increases |
| 0 | 1 | Natronincola | genus | Increases |
| 0 | 1 | Niameybacter | genus | Increases |
| 0 | 1 | Olegusella | genus | Increases |
| 0 | 1 | Oliverpabstia | genus | Increases |
| 0 | 1 | Oribacterium | genus | Increases |
| 0 | 1 | Oxobacter | genus | Increases |
| 0 | 1 | Parablautia | genus | Increases |
| 0 | 1 | Paramaledivibacter | genus | Increases |
| 0 | 1 | Pararoseburia | genus | Increases |
| 0 | 1 | Parasporobacterium | genus | Increases |
| 0 | 1 | Parvibacter | genus | Increases |
| 0 | 1 | Porcincola | genus | Increases |
| 0 | 1 | Robinsoniella | genus | Increases |
| 0 | 1 | Sakamotonia | genus | Increases |
| 0 | 1 | Schaedlerella | genus | Increases |
| 0 | 1 | Senegalia | genus | Increases |
| 0 | 1 | Senegalimassilia | genus | Increases |
| 0 | 1 | Serpentinicella | genus | Increases |
| 0 | 1 | Shuttleworthella | genus | Increases |
| 0 | 1 | Sporobacterium | genus | Increases |
| 0 | 1 | Sporosalibacterium | genus | Increases |
| 0 | 1 | Stomatobaculum | genus | Increases |
| 0 | 1 | Suonthocola | genus | Increases |
| 0 | 1 | Syntrophococcus | genus | Increases |
| 0 | 1 | Thermobrachium | genus | Increases |
| 0 | 1 | Thermohalobacter | genus | Increases |
| 0 | 1 | Thermotalea | genus | Increases |
| 0 | 1 | Tindallia | genus | Increases |
| 0 | 1 | Waltera | genus | Increases |
| 0 | 1 | Youngiibacter | genus | Increases |
| 0 | 1 | Zhenhengia | genus | Increases |
| 1 | 0 | Fusobacterium | genus | Increases |
| 1 | 0 | Megasphaera | genus | Increases |
| 1 | 0 | Propionibacterium | genus | Increases |
| 0 | 1 | Ruminococcus | genus | Increases |
| 0 | 1 | Coprococcus | genus | Increases |
| 0 | 1 | Anaerostipes | genus | Increases |
| 0 | 1 | Dorea | genus | Increases |
| 0 | 1 | Anaerobutyricum | genus | Increases |
| 0 | 2 | Lachnospira | genus | Increases |
| 0 | 1 | Keratinibaculum | genus | Increases |
| 0 | 2 | Blautia | genus | Increases |
| 0 | 2 | Agathobacter | genus | Increases |
| 2 | 0 | Faecalibacterium | genus | Increases |
| 2 | 0 | Streptococcus | genus | Increases |
| 3 | 1 | Bacteroides | genus | Increases |
| 0 | 2 | Roseburia | genus | Increases |
| 1 | 1 | Collinsella | genus | Increases |
| 2 | 0 | Clostridium | genus | Increases |
| 3 | 0 | Lactobacillus | genus | Increases |
| 2 | 1 | Bifidobacterium | genus | Increases |
| 3 | 0 | Eubacterium | genus | Increases |
| 0 | 1 | Escherichia coli O25:H16 | no rank | Decreases |
| 0 | 1 | Bacteroidaceae incertae sedis | no rank | Decreases |
| 0 | 1 | Bacteroidetes incertae sedis | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 3 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | environmental samples | no rank | Decreases |
| 0 | 1 | Escherichia coli O145:H34 | no rank | Decreases |
| 0 | 1 | Escherichia coli O16:H48 | no rank | Decreases |
| 0 | 1 | Mycoplasmatota incertae sedis | no rank | Decreases |
| 0 | 1 | Pseudomonadota incertae sedis | no rank | Decreases |
| 0 | 1 | unclassified Acidaminococcus | no rank | Decreases |
| 0 | 1 | unclassified Bacteroidaceae | no rank | Decreases |
| 0 | 1 | unclassified Bacteroidota | no rank | Decreases |
| 0 | 1 | unclassified Marvinbryantia | no rank | Decreases |
| 0 | 1 | unclassified Mycoplasmatota | no rank | Decreases |
| 0 | 1 | unclassified Porphyromonas | no rank | Decreases |
| 0 | 3 | unclassified Prevotella | no rank | Decreases |
| 0 | 1 | unclassified Prevotellaceae | no rank | Decreases |
| 0 | 1 | unclassified Pseudomonadota | no rank | Decreases |
| 0 | 1 | unclassified Tannerella | no rank | Decreases |
| 0 | 1 | unclassified Tyzzerella | no rank | Decreases |
| 0 | 1 | unclassified Verrucomicrobiota | no rank | Decreases |
| 0 | 1 | Verrucomicrobiota incertae sedis | no rank | Decreases |
| 0 | 1 | Escherichia coli O141:H4 | no rank | Decreases |
| 0 | 1 | Escherichia coli O139:H1 | no rank | Decreases |
| 0 | 1 | Escherichia coli O80:H26 | no rank | Decreases |
| 0 | 1 | Escherichia coli O158:H23 | no rank | Decreases |
| 0 | 1 | Escherichia coli O84:H7 | no rank | Decreases |
| 0 | 1 | Escherichia coli O2:K1:H4 | no rank | Decreases |
| 0 | 1 | Escherichia coli O2:K1:H7 | no rank | Decreases |
| 0 | 1 | Escherichia coli O78:H51 | no rank | Decreases |
| 0 | 1 | Escherichia coli O18ac:H14 | no rank | Decreases |
| 0 | 1 | Escherichia coli O85:H1 | no rank | Decreases |
| 0 | 1 | Escherichia coli O7:H15 | no rank | Decreases |
| 0 | 1 | Escherichia coli O68:H12 | no rank | Decreases |
| 0 | 1 | Escherichia coli O55:H7 | no rank | Decreases |
| 0 | 1 | Escherichia coli O1:K1:H7 | no rank | Decreases |
| 0 | 1 | Escherichia coli O15:H12 | no rank | Decreases |
| 0 | 1 | Escherichia coli O170:H18 | no rank | Decreases |
| 0 | 1 | Escherichia coli O155:H21 | no rank | Decreases |
| 0 | 1 | Escherichia coli O19:H7 | no rank | Decreases |
| 0 | 1 | Escherichia coli O2:K1:H5 | no rank | Decreases |
| 0 | 1 | Escherichia coli O20:H12 | no rank | Decreases |
| 0 | 2 | environmental samples | no rank | Decreases |
| 0 | 2 | unclassified Akkermansia | no rank | Decreases |
| 0 | 1 | Clostridiaceae incertae sedis | no rank | Increases |
| 0 | 1 | Coriobacteriaceae incertae sedis | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 3 | environmental samples | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 1 | environmental samples | no rank | Increases |
| 0 | 1 | Lachnospiraceae incertae sedis | no rank | Increases |
| 0 | 3 | unclassified Bacteroides | no rank | Increases |
| 0 | 1 | unclassified Clostridiaceae | no rank | Increases |
| 0 | 1 | unclassified Collinsella | no rank | Increases |
| 0 | 1 | unclassified Coriobacteriaceae | no rank | Increases |
| 0 | 1 | unclassified Fusobacterium | no rank | Increases |
| 0 | 1 | unclassified Lachnospiraceae | no rank | Increases |
| 0 | 1 | unclassified Megasphaera | no rank | Increases |
| 0 | 1 | unclassified Propionibacterium | no rank | Increases |
| 0 | 2 | environmental samples | no rank | Increases |
| 0 | 2 | environmental samples | no rank | Increases |
| 0 | 2 | environmental samples | no rank | Increases |
| 0 | 2 | environmental samples | no rank | Increases |
| 0 | 2 | unclassified Bifidobacterium | no rank | Increases |
| 0 | 2 | unclassified Clostridium | no rank | Increases |
| 0 | 2 | unclassified Faecalibacterium | no rank | Increases |
| 0 | 2 | unclassified Streptococcus | no rank | Increases |
| 1 | 0 | Oscillospiraceae incertae sedis | no rank | Increases |
| 0 | 3 | environmental samples | no rank | Increases |
| 0 | 3 | environmental samples | no rank | Increases |
| 0 | 3 | unclassified Eubacterium (in: firmicutes) | no rank | Increases |
| 0 | 3 | unclassified Lactobacillus | no rank | Increases |
| 0 | 1 | Bacteroidales | order | Decreases |
| 0 | 1 | unclassified Bacteroidetes Order II. | order | Decreases |
| 0 | 1 | Mycoplasmoidales | order | Decreases |
| 0 | 1 | Coriobacteriales | order | Increases |
| 0 | 2 | Eubacteriales | order | Increases |
| 1 | 0 | Bacteroidota | phylum | Decreases |
| 1 | 0 | Mycoplasmatota | phylum | Decreases |
| 1 | 0 | Pseudomonadota | phylum | Decreases |
| 1 | 0 | Verrucomicrobiota | phylum | Decreases |
| 0 | 3 | Bacteroides togonis | QST454 | Increases |
| 0 | 3 | Bacteroides bouchesdurhonensis | QSV445 | Increases |
| 0 | 1 | Escherichia coli O111 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O121 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O155 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O177 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O26 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O3 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O5 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O86 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O91 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O103 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O78 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O43 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O119 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O157 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O145 | serogroup | Decreases |
| 0 | 1 | Escherichia coli O1:HNT | serotype | Decreases |
| 0 | 1 | Escherichia coli O10:K5(L):H4 | serotype | Decreases |
| 0 | 1 | Escherichia coli O103:H11 | serotype | Decreases |
| 0 | 1 | Escherichia coli O103:H25 | serotype | Decreases |
| 0 | 1 | Escherichia coli O104:H21 | serotype | Decreases |
| 0 | 1 | Escherichia coli O111:H11 | serotype | Decreases |
| 0 | 1 | Escherichia coli O111:H8 | serotype | Decreases |
| 0 | 1 | Escherichia coli O112ac:H19 | serotype | Decreases |
| 0 | 1 | Escherichia coli O114:H49 | serotype | Decreases |
| 0 | 1 | Escherichia coli O118:H16 | serotype | Decreases |
| 0 | 1 | Escherichia coli O121:H7 | serotype | Decreases |
| 0 | 1 | Escherichia coli O123:H11 | serotype | Decreases |
| 0 | 1 | Escherichia coli O127:H27 | serotype | Decreases |
| 0 | 1 | Escherichia coli O127:H6 | serotype | Decreases |
| 0 | 1 | Escherichia coli O128:H2 | serotype | Decreases |
| 0 | 1 | Escherichia coli O128ac:H12 | serotype | Decreases |
| 0 | 1 | Escherichia coli O145:H25 | serotype | Decreases |
| 0 | 1 | Escherichia coli O145:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O146:H21 | serotype | Decreases |
| 0 | 1 | Escherichia coli O153:H2 | serotype | Decreases |
| 0 | 1 | Escherichia coli O156:H25 | serotype | Decreases |
| 0 | 1 | Escherichia coli O157:H43 | serotype | Decreases |
| 0 | 1 | Escherichia coli O157:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O165:H25 | serotype | Decreases |
| 0 | 1 | Escherichia coli O174:H2 | serotype | Decreases |
| 0 | 1 | Escherichia coli O174:H21 | serotype | Decreases |
| 0 | 1 | Escherichia coli O174:H8 | serotype | Decreases |
| 0 | 1 | Escherichia coli O176:H45 | serotype | Decreases |
| 0 | 1 | Escherichia coli O177:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O26:H1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O28ac:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O29:H4 | serotype | Decreases |
| 0 | 1 | Escherichia coli O32:H37 | serotype | Decreases |
| 0 | 1 | Escherichia coli O6:H16:CFA/II | serotype | Decreases |
| 0 | 1 | Escherichia coli O69:H11 | serotype | Decreases |
| 0 | 1 | Escherichia coli O78:H12 | serotype | Decreases |
| 0 | 1 | Escherichia coli O79:H7 | serotype | Decreases |
| 0 | 1 | Escherichia coli O81:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O86:H34 | serotype | Decreases |
| 0 | 1 | Escherichia coli O91:H14 | serotype | Decreases |
| 0 | 1 | Escherichia coli O91:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli ONT:H33 | serotype | Decreases |
| 0 | 1 | Escherichia coli O100:H21 | serotype | Decreases |
| 0 | 1 | Escherichia coli O121:H19 | serotype | Decreases |
| 0 | 1 | Escherichia coli O157:H7 | serotype | Decreases |
| 0 | 1 | Escherichia coli O16:H6 | serotype | Decreases |
| 0 | 1 | Escherichia coli O89m:H9 | serotype | Decreases |
| 0 | 1 | Escherichia coli O111:H- | serotype | Decreases |
| 0 | 1 | Escherichia coli O113:H21 | serotype | Decreases |
| 0 | 1 | Escherichia coli H20 | serotype | Decreases |
| 0 | 1 | Escherichia coli O150:H6 | serotype | Decreases |
| 0 | 1 | Escherichia coli O111:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O112ab:H8 | serotype | Decreases |
| 0 | 1 | Escherichia coli O99:H6 | serotype | Decreases |
| 0 | 1 | Escherichia coli O26:H11 | serotype | Decreases |
| 0 | 1 | Escherichia coli O145:H28 | serotype | Decreases |
| 0 | 1 | Escherichia coli O126:H45 | serotype | Decreases |
| 0 | 1 | Escherichia coli O2:H6 | serotype | Decreases |
| 0 | 1 | Escherichia coli O7:H4 | serotype | Decreases |
| 0 | 1 | Escherichia coli O1:H42 | serotype | Decreases |
| 0 | 1 | Escherichia coli O25:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O25:H1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O7:K1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O125ac:K+:H10 | serotype | Decreases |
| 0 | 1 | Escherichia coli O6:K2:H1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O152:H23 | serotype | Decreases |
| 0 | 1 | Escherichia coli O15:H18 | serotype | Decreases |
| 0 | 1 | Escherichia coli O39:NM | serotype | Decreases |
| 0 | 1 | Escherichia coli O44:H18 | serotype | Decreases |
| 0 | 1 | Escherichia coli O2:K2:H1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O8:H8 | serotype | Decreases |
| 0 | 1 | Escherichia coli O89m:H10 | serotype | Decreases |
| 0 | 1 | Escherichia coli O10:H32 | serotype | Decreases |
| 0 | 1 | Escherichia coli O6:H16 | serotype | Decreases |
| 0 | 1 | Escherichia coli O157:H- | serotype | Decreases |
| 0 | 1 | Escherichia coli O45:H2 | serotype | Decreases |
| 0 | 1 | Escherichia coli O103:H2 | serotype | Decreases |
| 0 | 1 | Escherichia coli O167:H26 | serotype | Decreases |
| 0 | 1 | Escherichia coli O104:H4 | serotype | Decreases |
| 0 | 1 | Escherichia coli O83:H1 | serotype | Decreases |
| 0 | 1 | Escherichia coli O9:H10 | serotype | Decreases |
| 0 | 1 | Escherichia coli O78:H4 | serotype | Decreases |
| 0 | 1 | Escherichia coli O139:H28 | serotype | Decreases |
| 1 | 1 | Segatella copri | species | Decreases |
| 0 | 1 | [Clostridium] colinum | species | Decreases |
| 0 | 1 | Marvinbryantia formatexigens | species | Decreases |
| 0 | 2 | Prevotella sp. P5-119 | species | Decreases |
| 0 | 1 | Acidaminococcus intestini | species | Decreases |
| 0 | 1 | Leyella stercorea | species | Decreases |
| 1 | 0 | Phocaeicola plebeius | species | Decreases |
| 1 | 0 | Phocaeicola vulgatus | species | Decreases |
| 0 | 1 | Tannerella forsythia | species | Decreases |
| 0 | 1 | Leyella lascolaii | species | Decreases |
| 0 | 1 | Hoylesella timonensis | species | Decreases |
| 0 | 1 | Tannerella serpentiformis | species | Decreases |
| 0 | 3 | Prevotella bivia | species | Decreases |
| 0 | 1 | Acidaminococcus fermentans | species | Decreases |
| 0 | 1 | Hoylesella buccalis | species | Decreases |
| 0 | 1 | Porphyromonas asaccharolytica | species | Decreases |
| 0 | 1 | Porphyromonas somerae | species | Decreases |
| 0 | 1 | [Clostridium] nexile | species | Decreases |
| 0 | 1 | [Clostridium] piliforme | species | Decreases |
| 0 | 1 | Acidaminococcus massiliensis | species | Decreases |
| 0 | 1 | Acidaminococcus sp. D21 | species | Decreases |
| 0 | 1 | Acidaminococcus timonensis | species | Decreases |
| 0 | 1 | Bacteroides sp. | species | Decreases |
| 0 | 1 | Bacteroides sp. 1_1_14 | species | Decreases |
| 0 | 1 | Bacteroides sp. 1_1_30 | species | Decreases |
| 0 | 1 | Bacteroides sp. 14(A) | species | Decreases |
| 0 | 1 | Bacteroides sp. 1B2 | species | Decreases |
| 0 | 1 | Bacteroides sp. 2_1_22 | species | Decreases |
| 0 | 1 | Bacteroides sp. 2_1_33B | species | Decreases |
| 0 | 1 | Bacteroides sp. 2_2_4 | species | Decreases |
| 0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D11 | species | Decreases |
| 0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D7 | species | Decreases |
| 0 | 1 | Bacteroides sp. 2011_Ileo_VSA_D8 | species | Decreases |
| 0 | 1 | Bacteroides sp. 265d | species | Decreases |
| 0 | 1 | Bacteroides sp. 3_1_19 | species | Decreases |
| 0 | 1 | Bacteroides sp. 3_1_23 | species | Decreases |
| 0 | 1 | Bacteroides sp. 3_1_33FAA | species | Decreases |
| 0 | 1 | Bacteroides sp. 3_1_40A | species | Decreases |
| 0 | 1 | Bacteroides sp. 3_2_5 | species | Decreases |
| 0 | 1 | Bacteroides sp. 314-4 | species | Decreases |
| 0 | 1 | Bacteroides sp. 31SF15 | species | Decreases |
| 0 | 1 | Bacteroides sp. 35AE37 | species | Decreases |
| 0 | 1 | Bacteroides sp. 35BE34 | species | Decreases |
| 0 | 1 | Bacteroides sp. 35BE35 | species | Decreases |
| 0 | 1 | Bacteroides sp. 4_1_36 | species | Decreases |
| 0 | 1 | Bacteroides sp. 4_3_47FAA | species | Decreases |
| 0 | 1 | Bacteroides sp. 4072 | species | Decreases |
| 0 | 1 | Bacteroides sp. 6-8 | species | Decreases |
| 0 | 1 | Bacteroides sp. 7853 | species | Decreases |
| 0 | 1 | Bacteroides sp. 9_1_42FAA | species | Decreases |
| 0 | 1 | Bacteroides sp. A1C1 | species | Decreases |
| 0 | 1 | Bacteroides sp. AR20 | species | Decreases |
| 0 | 1 | Bacteroides sp. AR29 | species | Decreases |
| 0 | 1 | Bacteroides sp. baku-33 | species | Decreases |
| 0 | 1 | Bacteroides sp. BLBE-2 | species | Decreases |
| 0 | 1 | Bacteroides sp. CB57 | species | Decreases |
| 0 | 1 | Bacteroides sp. D1 | species | Decreases |
| 0 | 1 | Bacteroides sp. D2 | species | Decreases |
| 0 | 1 | Bacteroides sp. D20 | species | Decreases |
| 0 | 1 | Bacteroides sp. D22 | species | Decreases |
| 0 | 1 | Bacteroides sp. D8 | species | Decreases |
| 0 | 1 | Bacteroides sp. DJF_B097 | species | Decreases |
| 0 | 1 | Bacteroides sp. dnLKV2 | species | Decreases |
| 0 | 1 | Bacteroides sp. dnLKV3 | species | Decreases |
| 0 | 1 | Bacteroides sp. dnLKV7 | species | Decreases |
| 0 | 1 | Bacteroides sp. dnLKV9 | species | Decreases |
| 0 | 1 | Bacteroides sp. EBA5-17 | species | Decreases |
| 0 | 1 | Bacteroides sp. ES-27 | species | Decreases |
| 0 | 1 | Bacteroides sp. HGA0134 | species | Decreases |
| 0 | 1 | Bacteroides sp. HPS0048 | species | Decreases |
| 0 | 1 | Bacteroides sp. J1511 | species | Decreases |
| 0 | 1 | Bacteroides sp. MANG | species | Decreases |
| 0 | 1 | Bacteroides sp. NMBE5 | species | Decreases |
| 0 | 1 | Bacteroides sp. R6 | species | Decreases |
| 0 | 1 | Bacteroides sp. S-17 | species | Decreases |
| 0 | 1 | Bacteroides sp. S-18 | species | Decreases |
| 0 | 1 | Bacteroides sp. SLC1-38 | species | Decreases |
| 0 | 1 | Bacteroides sp. Smarlab 3301643 | species | Decreases |
| 0 | 1 | Bacteroides sp. Smarlab 3302398 | species | Decreases |
| 0 | 1 | Bacteroides sp. 'Smarlab BioMol-2301151' | species | Decreases |
| 0 | 1 | Bacteroides sp. TP-5 | species | Decreases |
| 0 | 1 | Bacteroides sp. UW | species | Decreases |
| 0 | 1 | Bacteroides sp. WA1 | species | Decreases |
| 0 | 1 | Bacteroides sp. WH302 | species | Decreases |
| 0 | 1 | Bacteroides sp. WH305 | species | Decreases |
| 0 | 1 | Bacteroides sp. XB12B | species | Decreases |
| 0 | 1 | Bacteroides sp. XB44A | species | Decreases |
| 0 | 1 | Candidatus [Bacteroides] periocalifornicus | species | Decreases |
| 0 | 3 | Candidatus Prevotella avicola | species | Decreases |
| 0 | 3 | Candidatus Prevotella stercoripullorum | species | Decreases |
| 0 | 1 | Hallella bergensis | species | Decreases |
| 0 | 1 | Hallella colorans | species | Decreases |
| 0 | 1 | Hallella multisaccharivorax | species | Decreases |
| 0 | 1 | Hallella seregens | species | Decreases |
| 0 | 1 | Hoylesella nanceiensis | species | Decreases |
| 0 | 1 | Hoylesella saccharolytica | species | Decreases |
| 0 | 1 | Phocaeicola barnesiae | species | Decreases |
| 0 | 1 | Phocaeicola massiliensis | species | Decreases |
| 0 | 1 | Phocaeicola paurosaccharolyticus | species | Decreases |
| 0 | 1 | Porphyromonas bennonis | species | Decreases |
| 0 | 1 | Porphyromonas bobii | species | Decreases |
| 0 | 1 | Porphyromonas canis | species | Decreases |
| 0 | 1 | Porphyromonas canoris | species | Decreases |
| 0 | 1 | Porphyromonas catoniae | species | Decreases |
| 0 | 1 | Porphyromonas circumdentaria | species | Decreases |
| 0 | 1 | Porphyromonas gulae | species | Decreases |
| 0 | 1 | Porphyromonas levii | species | Decreases |
| 0 | 1 | Porphyromonas macacae | species | Decreases |
| 0 | 1 | Porphyromonas pasteri | species | Decreases |
| 0 | 1 | Porphyromonas pogonae | species | Decreases |
| 0 | 1 | Porphyromonas uenonis | species | Decreases |
| 0 | 3 | Prevotella aurantiaca | species | Decreases |
| 0 | 3 | Prevotella brunnea | species | Decreases |
| 0 | 3 | Prevotella conceptionensis | species | Decreases |
| 0 | 3 | Prevotella dentasini | species | Decreases |
| 0 | 3 | Prevotella falsenii | species | Decreases |
| 0 | 3 | Prevotella marseillensis | species | Decreases |
| 0 | 3 | Prevotella merdae | species | Decreases |
| 0 | 3 | Prevotella pallens | species | Decreases |
| 0 | 3 | Prevotella pectinovora | species | Decreases |
| 0 | 3 | Prevotella phocaeensis | species | Decreases |
| 0 | 1 | Prevotella sp. | species | Decreases |
| 0 | 1 | Prevotella sp. AM34-19LB | species | Decreases |
| 0 | 1 | Prevotella sp. BV3C7 | species | Decreases |
| 0 | 1 | Prevotella sp. BV3P1 | species | Decreases |
| 0 | 1 | Prevotella sp. HJM029 | species | Decreases |
| 0 | 1 | Prevotella sp. MSX73 | species | Decreases |
| 0 | 1 | Prevotella sp. oral taxon 299 | species | Decreases |
| 0 | 1 | Prevotella sp. P5-108 | species | Decreases |
| 0 | 1 | Prevotella sp. S4-10 | species | Decreases |
| 0 | 1 | Prevotella sp. S8 F8 | species | Decreases |
| 0 | 1 | Prevotella sp. Smarlab 121567 | species | Decreases |
| 0 | 1 | Prevotella sp. WAL 2039G | species | Decreases |
| 0 | 1 | Segatella albensis | species | Decreases |
| 0 | 1 | Segatella hominis | species | Decreases |
| 0 | 1 | Segatella maculosa | species | Decreases |
| 0 | 1 | Segatella oulorum | species | Decreases |
| 0 | 1 | Segatella paludivivens | species | Decreases |
| 0 | 1 | Segatella salivae | species | Decreases |
| 0 | 3 | Xylanibacter oryzae | species | Decreases |
| 0 | 3 | Xylanibacter rarus | species | Decreases |
| 0 | 1 | Phocaeicola dorei | species | Decreases |
| 1 | 0 | Escherichia coli | species | Decreases |
| 0 | 3 | Prevotella massiliensis | species | Decreases |
| 0 | 3 | Prevotella intermedia | species | Decreases |
| 0 | 1 | Porphyromonas gingivalis | species | Decreases |
| 0 | 3 | Prevotella dentalis | species | Decreases |
| 0 | 3 | Prevotella denticola | species | Decreases |
| 0 | 3 | Prevotella corporis | species | Decreases |
| 0 | 3 | Prevotella melaninogenica | species | Decreases |
| 0 | 3 | Prevotella disiens | species | Decreases |
| 0 | 1 | Segatella bryantii | species | Decreases |
| 0 | 3 | Prevotella veroralis | species | Decreases |
| 0 | 1 | Hoylesella shahii | species | Decreases |
| 0 | 3 | Prevotella jejuni | species | Decreases |
| 0 | 3 | Prevotella scopos | species | Decreases |
| 0 | 3 | Prevotella nigrescens | species | Decreases |
| 0 | 3 | Prevotella communis | species | Decreases |
| 0 | 1 | Hoylesella marshii | species | Decreases |
| 0 | 1 | Porphyromonas cangingivalis | species | Decreases |
| 0 | 3 | Prevotella amnii | species | Decreases |
| 0 | 3 | Prevotella histicola | species | Decreases |
| 0 | 3 | Xylanibacter ruminicola | species | Decreases |
| 0 | 1 | Porphyromonas endodontalis | species | Decreases |
| 0 | 3 | Prevotella micans | species | Decreases |
| 0 | 1 | Phocaeicola salanitronis | species | Decreases |
| 0 | 3 | Xylanibacter brevis | species | Decreases |
| 0 | 3 | Prevotella multiformis | species | Decreases |
| 0 | 1 | Hoylesella pleuritidis | species | Decreases |
| 0 | 1 | Porphyromonas crevioricanis | species | Decreases |
| 0 | 3 | Prevotella herbatica | species | Decreases |
| 0 | 1 | Segatella buccae | species | Decreases |
| 0 | 1 | Phocaeicola coprophilus | species | Decreases |
| 0 | 1 | Hoylesella enoeca | species | Decreases |
| 0 | 1 | Hoylesella oralis | species | Decreases |
| 0 | 1 | Segatella oris | species | Decreases |
| 0 | 3 | Prevotella fusca | species | Decreases |
| 0 | 1 | Segatella baroniae | species | Decreases |
| 0 | 1 | Hoylesella loescheii | species | Decreases |
| 0 | 1 | Phocaeicola sartorii | species | Decreases |
| 0 | 1 | Phocaeicola coprocola | species | Decreases |
| 0 | 1 | Lacrimispora xylanisolvens | species | Decreases |
| 0 | 2 | Akkermansia glycaniphila | species | Decreases |
| 0 | 2 | Akkermansia massiliensis | species | Decreases |
| 0 | 2 | Bacteroides caecimuri | species | Decreases |
| 0 | 2 | Bacteroides chinchillae | species | Decreases |
| 0 | 2 | Bacteroides sp | species | Decreases |
| 0 | 2 | Bacteroides sp. C13EG172 | species | Decreases |
| 0 | 2 | Candidatus Akkermansia intestinavium | species | Decreases |
| 0 | 2 | Bifidobacterium saguini | species | Increases |
| 0 | 2 | Bifidobacterium pseudolongum | species | Increases |
| 0 | 3 | Bacteroides zoogleoformans | species | Increases |
| 0 | 2 | Bifidobacterium asteroides | species | Increases |
| 0 | 3 | Lactobacillus ultunensis | species | Increases |
| 0 | 2 | Streptococcus ferus | species | Increases |
| 0 | 1 | Fusobacterium vincentii | species | Increases |
| 0 | 2 | Bifidobacterium subtile | species | Increases |
| 0 | 3 | Bacteroides coprosuis | species | Increases |
| 0 | 3 | Bacteroides heparinolyticus | species | Increases |
| 0 | 2 | Bifidobacterium pullorum | species | Increases |
| 0 | 1 | Fusobacterium necrophorum | species | Increases |
| 0 | 2 | Clostridium pasteurianum | species | Increases |
| 0 | 2 | Clostridium estertheticum | species | Increases |
| 0 | 2 | Streptococcus sobrinus | species | Increases |
| 0 | 2 | Streptococcus iniae | species | Increases |
| 0 | 2 | Streptococcus pyogenes | species | Increases |
| 0 | 2 | Streptococcus ruminantium | species | Increases |
| 0 | 2 | Bifidobacterium animalis | species | Increases |
| 0 | 2 | Streptococcus parasuis | species | Increases |
| 0 | 2 | Clostridium thermarum | species | Increases |
| 0 | 3 | Bacteroides zhangwenhongii | species | Increases |
| 0 | 2 | Streptococcus canis | species | Increases |
| 0 | 2 | Streptococcus infantarius | species | Increases |
| 0 | 3 | Bacteroides nordii | species | Increases |
| 0 | 3 | Bacteroides stercoris | species | Increases |
| 0 | 2 | Bifidobacterium scardovii | species | Increases |
| 0 | 2 | Bifidobacterium imperatoris | species | Increases |
| 0 | 2 | Bifidobacterium thermophilum | species | Increases |
| 0 | 2 | Bifidobacterium lemurum | species | Increases |
| 0 | 3 | Bacteroides cellulosilyticus | species | Increases |
| 0 | 2 | Streptococcus urinalis | species | Increases |
| 0 | 2 | Streptococcus suis | species | Increases |
| 0 | 3 | Bacteroides caccae | species | Increases |
| 0 | 2 | Clostridium manihotivorum | species | Increases |
| 0 | 2 | Streptococcus alactolyticus | species | Increases |
| 0 | 2 | Bifidobacterium eulemuris | species | Increases |
| 0 | 2 | Streptococcus equinus | species | Increases |
| 0 | 1 | Fusobacterium periodonticum | species | Increases |
| 0 | 2 | Streptococcus agalactiae | species | Increases |
| 0 | 1 | Fusobacterium canifelinum | species | Increases |
| 0 | 2 | Streptococcus acidominimus | species | Increases |
| 0 | 2 | Clostridium neonatale | species | Increases |
| 0 | 1 | Fusobacterium hominis | species | Increases |
| 0 | 1 | Fusobacterium animalis | species | Increases |
| 0 | 1 | Fusobacterium hwasookii | species | Increases |
| 0 | 2 | Clostridium bornimense | species | Increases |
| 0 | 3 | Bacteroides eggerthii | species | Increases |
| 0 | 2 | Streptococcus porcinus | species | Increases |
| 1 | 1 | Akkermansia muciniphila | species | Increases |
| 0 | 2 | Streptococcus pasteurianus | species | Increases |
| 0 | 1 | Collinsella stercoris | species | Increases |
| 0 | 1 | Fusobacterium pseudoperiodonticum | species | Increases |
| 0 | 2 | Streptococcus lutetiensis | species | Increases |
| 0 | 2 | Clostridium tyrobutyricum | species | Increases |
| 0 | 1 | Fusobacterium nucleatum | species | Increases |
| 0 | 2 | Bifidobacterium dentium | species | Increases |
| 0 | 3 | Bacteroides helcogenes | species | Increases |
| 0 | 3 | Bacteroides faecis | species | Increases |
| 0 | 2 | Streptococcus pluranimalium | species | Increases |
| 0 | 2 | Clostridium kluyveri | species | Increases |
| 0 | 2 | Clostridium tetani | species | Increases |
| 0 | 3 | Bacteroides salyersiae | species | Increases |
| 0 | 2 | Streptococcus pseudoporcinus | species | Increases |
| 0 | 1 | Fusobacterium polymorphum | species | Increases |
| 0 | 3 | Lactobacillus helveticus | species | Increases |
| 0 | 2 | Streptococcus himalayensis | species | Increases |
| 0 | 1 | Fusobacterium gonidiaformans | species | Increases |
| 0 | 1 | Fusobacterium varium | species | Increases |
| 0 | 2 | Streptococcus gallolyticus | species | Increases |
| 0 | 2 | Bifidobacterium choerinum | species | Increases |
| 0 | 2 | Streptococcus uberis | species | Increases |
| 0 | 1 | Fusobacterium ulcerans | species | Increases |
| 0 | 2 | Streptococcus macedonicus | species | Increases |
| 0 | 3 | Bacteroides faecium | species | Increases |
| 0 | 2 | Clostridium felsineum | species | Increases |
| 0 | 2 | Streptococcus parauberis | species | Increases |
| 0 | 3 | Bacteroides humanifaecis | species | Increases |
| 0 | 2 | Clostridium scatologenes | species | Increases |
| 0 | 2 | Clostridium carboxidivorans | species | Increases |
| 0 | 1 | Megasphaera massiliensis | species | Increases |
| 0 | 3 | Bacteroides caecimuris | species | Increases |
| 0 | 3 | Bacteroides thetaiotaomicron | species | Increases |
| 0 | 2 | Streptococcus cristatus | species | Increases |
| 0 | 2 | Streptococcus periodonticum | species | Increases |
| 0 | 2 | Clostridium botulinum | species | Increases |
| 0 | 2 | Clostridium beijerinckii | species | Increases |
| 0 | 1 | Anaerocolumna chitinilytica | species | Increases |
| 0 | 2 | Streptococcus ruminicola | species | Increases |
| 0 | 3 | Bacteroides xylanisolvens | species | Increases |
| 0 | 2 | Streptococcus milleri | species | Increases |
| 0 | 3 | Lactobacillus johnsonii | species | Increases |
| 0 | 1 | Propionibacterium australiense | species | Increases |
| 0 | 2 | Clostridium baratii | species | Increases |
| 0 | 2 | Streptococcus mutans | species | Increases |
| 0 | 3 | Bacteroides fragilis | species | Increases |
| 0 | 3 | Lactobacillus kefiranofaciens | species | Increases |
| 0 | 3 | Bacteroides luhongzhouii | species | Increases |
| 0 | 3 | Lactobacillus amylolyticus | species | Increases |
| 0 | 3 | Bacteroides uniformis | species | Increases |
| 0 | 2 | Clostridium septicum | species | Increases |
| 0 | 2 | Clostridium chauvoei | species | Increases |
| 0 | 1 | Megasphaera stantonii | species | Increases |
| 0 | 2 | Streptococcus merionis | species | Increases |
| 0 | 2 | Clostridium gelidum | species | Increases |
| 0 | 2 | Clostridium saccharoperbutylacetonicum | species | Increases |
| 0 | 2 | Streptococcus toyakuensis | species | Increases |
| 0 | 2 | Clostridium cochlearium | species | Increases |
| 0 | 2 | Clostridium isatidis | species | Increases |
| 0 | 2 | Streptococcus rubneri | species | Increases |
| 0 | 1 | [Clostridium] cellulosi | species | Increases |
| 0 | 1 | [Clostridium] leptum | species | Increases |
| 0 | 1 | [Clostridium] methylpentosum | species | Increases |
| 0 | 1 | [Clostridium] viride | species | Increases |
| 0 | 3 | Bacteroides acidifaciens | species | Increases |
| 0 | 3 | Bacteroides caecigallinarum | species | Increases |
| 0 | 3 | Bacteroides clarus | species | Increases |
| 0 | 3 | Bacteroides congonensis | species | Increases |
| 0 | 3 | Bacteroides cutis | species | Increases |
| 0 | 3 | Bacteroides denticanum | species | Increases |
| 0 | 3 | Bacteroides difficilis | species | Increases |
| 0 | 3 | Bacteroides faecalis | species | Increases |
| 0 | 3 | Bacteroides faecichinchillae | species | Increases |
| 0 | 3 | Bacteroides finegoldii | species | Increases |
| 0 | 3 | Bacteroides fluxus | species | Increases |
| 0 | 3 | Bacteroides galacturonicus | species | Increases |
| 0 | 3 | Bacteroides gallinaceum | species | Increases |
| 0 | 3 | Bacteroides gallinarum | species | Increases |
| 0 | 3 | Bacteroides graminisolvens | species | Increases |
| 0 | 3 | Bacteroides ihuae | species | Increases |
| 0 | 3 | Bacteroides ilei | species | Increases |
| 0 | 3 | Bacteroides koreensis | species | Increases |
| 0 | 3 | Bacteroides kribbi | species | Increases |
| 0 | 3 | Bacteroides luti | species | Increases |
| 0 | 3 | Bacteroides mediterraneensis | species | Increases |
| 0 | 3 | Bacteroides muris (ex Fokt et al. 2023) | species | Increases |
| 0 | 3 | Bacteroides ndongoniae | species | Increases |
| 0 | 3 | Bacteroides oleiciplenus | species | Increases |
| 0 | 3 | Bacteroides parvus | species | Increases |
| 0 | 3 | Bacteroides propionicifaciens | species | Increases |
| 0 | 3 | Bacteroides propionicigenes | species | Increases |
| 0 | 3 | Bacteroides pyogenes | species | Increases |
| 0 | 3 | Bacteroides reticulotermitis | species | Increases |
| 0 | 3 | Bacteroides rhinocerotis | species | Increases |
| 0 | 3 | Bacteroides rodentium | species | Increases |
| 0 | 3 | Bacteroides stercorirosoris | species | Increases |
| 0 | 3 | Bacteroides timonensis | species | Increases |
| 0 | 1 | Bifidobacterium stercoris | species | Increases |
| 0 | 3 | Candidatus Bacteroides intestinigallinarum | species | Increases |
| 0 | 1 | Candidatus Collinsella stercoripullorum | species | Increases |
| 0 | 1 | Clostridium aurantibutyricum | species | Increases |
| 0 | 1 | Clostridium sp. | species | Increases |
| 0 | 1 | Clostridium sp. 1_1_41A1FAA | species | Increases |
| 0 | 1 | Clostridium sp. 14505 | species | Increases |
| 0 | 1 | Clostridium sp. 4 | species | Increases |
| 0 | 1 | Clostridium sp. 619 | species | Increases |
| 0 | 1 | Clostridium sp. 6-22 | species | Increases |
| 0 | 1 | Clostridium sp. 6-24 | species | Increases |
| 0 | 1 | Clostridium sp. 7_2_43FAA | species | Increases |
| 0 | 1 | Clostridium sp. A9 | species | Increases |
| 0 | 1 | Clostridium sp. ACB-29 | species | Increases |
| 0 | 1 | Clostridium sp. AN-AS6E | species | Increases |
| 0 | 1 | Clostridium sp. AT32 | species | Increases |
| 0 | 1 | Clostridium sp. AT4 | species | Increases |
| 0 | 1 | Clostridium sp. ATCC BAA-442 | species | Increases |
| 0 | 1 | Clostridium sp. AUH-JLC140 | species | Increases |
| 0 | 1 | Clostridium sp. AUH-JLC235 | species | Increases |
| 0 | 1 | Clostridium sp. AWRP | species | Increases |
| 0 | 1 | Clostridium sp. BG-C122 | species | Increases |
| 0 | 1 | Clostridium sp. BG-C36 | species | Increases |
| 0 | 1 | Clostridium sp. BNL1100 | species | Increases |
| 0 | 1 | Clostridium sp. BPY5 | species | Increases |
| 0 | 1 | Clostridium sp. BS-5 | species | Increases |
| 0 | 1 | Clostridium sp. C-1 | species | Increases |
| 0 | 1 | Clostridium sp. Clone-17 | species | Increases |
| 0 | 1 | Clostridium sp. Clone-24 | species | Increases |
| 0 | 1 | Clostridium sp. Clone-49 | species | Increases |
| 0 | 1 | Clostridium sp. CM-C81 | species | Increases |
| 0 | 1 | Clostridium sp. cTPY-17 | species | Increases |
| 0 | 1 | Clostridium sp. Culture Jar-8 | species | Increases |
| 0 | 1 | Clostridium sp. Culture-1 | species | Increases |
| 0 | 1 | Clostridium sp. DL-VIII | species | Increases |
| 0 | 1 | Clostridium sp. EDB2 | species | Increases |
| 0 | 1 | Clostridium sp. FA2/18 | species | Increases |
| 0 | 1 | Clostridium sp. FCB45 | species | Increases |
| 0 | 1 | Clostridium sp. FCB90-3 | species | Increases |
| 0 | 1 | Clostridium sp. ID5 | species | Increases |
| 0 | 1 | Clostridium sp. JN-1 | species | Increases |
| 0 | 1 | Clostridium sp. JN-9 | species | Increases |
| 0 | 1 | Clostridium sp. JPL_22 | species | Increases |
| 0 | 1 | Clostridium sp. KLE 1755 | species | Increases |
| 0 | 1 | Clostridium sp. L2-50 | species | Increases |
| 0 | 1 | Clostridium sp. M62/1 | species | Increases |
| 0 | 1 | Clostridium sp. Marseille-P2776 | species | Increases |
| 0 | 1 | Clostridium sp. Marseille-P3122 | species | Increases |
| 0 | 1 | Clostridium sp. Marseille-P3244 | species | Increases |
| 0 | 1 | Clostridium sp. MC_30 | species | Increases |
| 0 | 1 | Clostridium sp. MDA2315 | species | Increases |
| 0 | 1 | Clostridium sp. MF28 | species | Increases |
| 0 | 1 | Clostridium sp. MK12 | species | Increases |
| 0 | 1 | Clostridium sp. MLG480 | species | Increases |
| 0 | 1 | Clostridium sp. MLG856-1 | species | Increases |
| 0 | 1 | Clostridium sp. MSTE9 | species | Increases |
| 0 | 1 | Clostridium sp. NAAn | species | Increases |
| 0 | 1 | Clostridium sp. NML 04A032 | species | Increases |
| 0 | 1 | Clostridium sp. NT-1 | species | Increases |
| 0 | 1 | Clostridium sp. P301 | species | Increases |
| 0 | 1 | Clostridium sp. Pao32 | species | Increases |
| 0 | 1 | Clostridium sp. PPf35E6 | species | Increases |
| 0 | 1 | Clostridium sp. R96 | species | Increases |
| 0 | 1 | Clostridium sp. SR1 | species | Increases |
| 0 | 1 | Clostridium sp. SS2/1 | species | Increases |
| 0 | 1 | Clostridium sp. strain P2 | species | Increases |
| 0 | 1 | Clostridium sp. SW003 | species | Increases |
| 0 | 1 | Clostridium sp. SY8519 | species | Increases |
| 0 | 1 | Clostridium sp. T28_5 | species | Increases |
| 0 | 1 | Clostridium sp. TB5 | species | Increases |
| 0 | 1 | Clostridium sp. TDO | species | Increases |
| 0 | 1 | Clostridium sp. TF01-11 | species | Increases |
| 0 | 1 | Clostridium sp. TM-40 | species | Increases |
| 0 | 1 | Clostridium sp. YIT 12069 | species | Increases |
| 0 | 1 | Collinsella acetigenes | species | Increases |
| 0 | 1 | Collinsella bouchesdurhonensis | species | Increases |
| 0 | 1 | Collinsella intestinalis | species | Increases |
| 0 | 1 | Collinsella phocaeensis | species | Increases |
| 0 | 1 | Collinsella provencensis | species | Increases |
| 0 | 1 | Collinsella sp. | species | Increases |
| 0 | 1 | Collinsella sp. 4_8_47FAA | species | Increases |
| 0 | 1 | Collinsella sp. AM34-10 | species | Increases |
| 0 | 1 | Collinsella tanakaei | species | Increases |
| 0 | 1 | Faecalispora sporosphaeroides | species | Increases |
| 0 | 1 | Fusobacterium equinum | species | Increases |
| 0 | 1 | Fusobacterium gastrosuis | species | Increases |
| 0 | 1 | Fusobacterium naviforme | species | Increases |
| 0 | 1 | Fusobacterium necrogenes | species | Increases |
| 0 | 1 | Fusobacterium perfoetens | species | Increases |
| 0 | 1 | Fusobacterium russii | species | Increases |
| 0 | 1 | Fusobacterium simiae | species | Increases |
| 0 | 1 | Megasphaera butyrica | species | Increases |
| 0 | 1 | Megasphaera cerevisiae | species | Increases |
| 0 | 1 | Megasphaera genomosp. C1 | species | Increases |
| 0 | 1 | Megasphaera genomosp. type_1 | species | Increases |
| 0 | 1 | Megasphaera hominis | species | Increases |
| 0 | 1 | Megasphaera indica | species | Increases |
| 0 | 1 | Megasphaera lornae | species | Increases |
| 0 | 1 | Megasphaera micronuciformis | species | Increases |
| 0 | 1 | Megasphaera paucivorans | species | Increases |
| 0 | 1 | Megasphaera sueciensis | species | Increases |
| 0 | 1 | Megasphaera vaginalis (ex Bordigoni et al. 2020) | species | Increases |
| 0 | 1 | Megasphaera vaginalis (ex Srinivasan et al. 2021) | species | Increases |
| 0 | 1 | Sarcina maxima | species | Increases |
| 0 | 1 | Sarcina ventriculi | species | Increases |
| 0 | 1 | unclassified Ruminococcaceae (miscellaneous) | species | Increases |
| 0 | 2 | Clostridium sporogenes | species | Increases |
| 0 | 2 | Streptococcus koreensis | species | Increases |
| 1 | 0 | Agathobacter rectalis | species | Increases |
| 1 | 0 | Blautia producta | species | Increases |
| 0 | 2 | Clostridium islandicum | species | Increases |
| 1 | 0 | Lachnospira eligens | species | Increases |
| 1 | 0 | Ruminococcus bromii | species | Increases |
| 0 | 1 | Fusobacterium mortiferum | species | Increases |
| 0 | 3 | Eubacterium maltosivorans | species | Increases |
| 0 | 2 | Clostridium argentinense | species | Increases |
| 0 | 2 | Streptococcus ratti | species | Increases |
| 0 | 1 | Megasphaera hexanoica | species | Increases |
| 0 | 3 | Lactobacillus acetotolerans | species | Increases |
| 0 | 3 | Eubacterium callanderi | species | Increases |
| 0 | 2 | Streptococcus pseudopneumoniae | species | Increases |
| 0 | 2 | Clostridium taeniosporum | species | Increases |
| 0 | 2 | Clostridium cellulovorans | species | Increases |
| 0 | 3 | Lactobacillus amylovorus | species | Increases |
| 0 | 2 | Streptococcus sanguinis | species | Increases |
| 0 | 1 | Ruminiclostridium papyrosolvens | species | Increases |
| 0 | 2 | Streptococcus ilei | species | Increases |
| 0 | 2 | Streptococcus gwangjuense | species | Increases |
| 0 | 3 | Lactobacillus iners | species | Increases |
| 0 | 2 | Streptococcus oriscaviae | species | Increases |
| 0 | 2 | Clostridium gasigenes | species | Increases |
| 0 | 2 | Streptococcus infantis | species | Increases |
| 0 | 2 | Streptococcus troglodytae | species | Increases |
| 0 | 2 | Clostridium cadaveris | species | Increases |
| 0 | 1 | Propionibacterium freudenreichii | species | Increases |
| 0 | 2 | Streptococcus pneumoniae | species | Increases |
| 0 | 3 | Eubacterium limosum | species | Increases |
| 0 | 3 | Lactobacillus taiwanensis | species | Increases |
| 0 | 2 | Bifidobacterium angulatum | species | Increases |
| 0 | 2 | Clostridium saccharobutylicum | species | Increases |
| 0 | 2 | Streptococcus gordonii | species | Increases |
| 1 | 1 | Clostridium butyricum | species | Increases |
| 0 | 2 | Clostridium acetobutylicum | species | Increases |
| 0 | 2 | Streptococcus mitis | species | Increases |
| 0 | 2 | Clostridium intestinale | species | Increases |
| 0 | 2 | Bifidobacterium bifidum | species | Increases |
| 0 | 3 | Lactobacillus crispatus | species | Increases |
| 0 | 1 | Megasphaera elsdenii | species | Increases |
| 0 | 1 | Propionibacterium acidifaciens | species | Increases |
| 0 | 2 | Clostridium fermenticellae | species | Increases |
| 0 | 2 | Streptococcus vestibularis | species | Increases |
| 0 | 3 | Lactobacillus intestinalis | species | Increases |
| 0 | 2 | Streptococcus oralis | species | Increases |
| 0 | 2 | Streptococcus lactarius | species | Increases |
| 0 | 2 | Clostridium perfringens | species | Increases |
| 0 | 2 | Bifidobacterium catenulatum | species | Increases |
| 0 | 2 | Streptococcus australis | species | Increases |
| 0 | 2 | [Butyribacterium] methylotrophicum | species | Increases |
| 0 | 2 | Bifidobacterium actinocoloniiforme | species | Increases |
| 0 | 2 | Bifidobacterium aesculapii | species | Increases |
| 0 | 2 | Bifidobacterium avesanii | species | Increases |
| 0 | 2 | Bifidobacterium biavatii | species | Increases |
| 0 | 2 | Bifidobacterium bohemicum | species | Increases |
| 0 | 2 | Bifidobacterium bombi | species | Increases |
| 0 | 2 | Bifidobacterium boum | species | Increases |
| 0 | 2 | Bifidobacterium callitrichidarum | species | Increases |
| 0 | 2 | Bifidobacterium callitrichos | species | Increases |
| 0 | 2 | Bifidobacterium commune | species | Increases |
| 0 | 2 | Bifidobacterium coryneforme | species | Increases |
| 0 | 2 | Bifidobacterium cuniculi | species | Increases |
| 0 | 2 | Bifidobacterium faecale | species | Increases |
| 0 | 2 | Bifidobacterium gallicum | species | Increases |
| 0 | 2 | Bifidobacterium indicum | species | Increases |
| 0 | 2 | Bifidobacterium magnum | species | Increases |
| 0 | 2 | Bifidobacterium merycicum | species | Increases |
| 0 | 2 | Bifidobacterium minimum | species | Increases |
| 0 | 2 | Bifidobacterium mongoliense | species | Increases |
| 0 | 2 | Bifidobacterium moukalabense | species | Increases |
| 0 | 2 | Bifidobacterium myosotis | species | Increases |
| 0 | 2 | Bifidobacterium porcinum | species | Increases |
| 0 | 2 | Bifidobacterium psychraerophilum | species | Increases |
| 0 | 2 | Bifidobacterium reuteri | species | Increases |
| 0 | 2 | Bifidobacterium ruminantium | species | Increases |
| 0 | 2 | Bifidobacterium simiae | species | Increases |
| 0 | 2 | Bifidobacterium stellenboschense | species | Increases |
| 0 | 2 | Bifidobacterium thermacidophilum | species | Increases |
| 0 | 2 | Bifidobacterium tissieri | species | Increases |
| 0 | 2 | Bifidobacterium tsurumiense | species | Increases |
| 0 | 2 | Clostridium aceticum | species | Increases |
| 0 | 2 | Clostridium acetireducens | species | Increases |
| 0 | 2 | Clostridium acidisoli | species | Increases |
| 0 | 2 | Clostridium aestuarii | species | Increases |
| 0 | 2 | Clostridium akagii | species | Increases |
| 0 | 2 | Clostridium algidicarnis | species | Increases |
| 0 | 2 | Clostridium algifaecis | species | Increases |
| 0 | 2 | Clostridium aminobutyricum | species | Increases |
| 0 | 2 | Clostridium amylolyticum | species | Increases |
| 0 | 2 | Clostridium autoethanogenum | species | Increases |
| 0 | 2 | Clostridium boliviensis | species | Increases |
| 0 | 2 | Clostridium bovifaecis | species | Increases |
| 0 | 2 | Clostridium bovipellis | species | Increases |
| 0 | 2 | Clostridium bowmanii | species | Increases |
| 0 | 2 | Clostridium caliptrosporum | species | Increases |
| 0 | 2 | Clostridium carnis | species | Increases |
| 0 | 2 | Clostridium cavendishii | species | Increases |
| 0 | 2 | Clostridium celatum | species | Increases |
| 0 | 2 | Clostridium chartatabidum | species | Increases |
| 0 | 2 | Clostridium chromiireducens | species | Increases |
| 0 | 2 | Clostridium colicanis | species | Increases |
| 0 | 2 | Clostridium collagenovorans | species | Increases |
| 0 | 2 | Clostridium combesii | species | Increases |
| 0 | 2 | Clostridium culturomicium | species | Increases |
| 0 | 2 | Clostridium cuniculi | species | Increases |
| 0 | 2 | Clostridium cylindrosporum | species | Increases |
| 0 | 2 | Clostridium diolis | species | Increases |
| 0 | 2 | Clostridium disporicum | species | Increases |
| 0 | 2 | Clostridium drakei | species | Increases |
| 0 | 2 | Clostridium facile | species | Increases |
| 0 | 2 | Clostridium fallax | species | Increases |
| 0 | 2 | Clostridium fessum | species | Increases |
| 0 | 2 | Clostridium formicaceticum | species | Increases |
| 0 | 2 | Clostridium frigidicarnis | species | Increases |
| 0 | 2 | Clostridium frigoris | species | Increases |
| 0 | 2 | Clostridium fungisolvens | species | Increases |
| 0 | 2 | Clostridium fusiformis | species | Increases |
| 0 | 2 | Clostridium ganghwense | species | Increases |
| 0 | 2 | Clostridium grantii | species | Increases |
| 0 | 2 | Clostridium haemolyticum | species | Increases |
| 0 | 2 | Clostridium homopropionicum | species | Increases |
| 0 | 2 | Clostridium hveragerdense | species | Increases |
| 0 | 2 | Clostridium hydrogeniformans | species | Increases |
| 0 | 2 | Clostridium jeddahitimonense | species | Increases |
| 0 | 2 | Clostridium kogasense | species | Increases |
| 0 | 2 | Clostridium lacusfryxellense | species | Increases |
| 0 | 2 | Clostridium lentum | species | Increases |
| 0 | 2 | Clostridium liquoris | species | Increases |
| 0 | 2 | Clostridium ljungdahlii | species | Increases |
| 0 | 2 | Clostridium longisporum | species | Increases |
| 0 | 2 | Clostridium lundense | species | Increases |
| 0 | 2 | Clostridium magnum | species | Increases |
| 0 | 2 | Clostridium malenominatum | species | Increases |
| 0 | 2 | Clostridium massiliamazoniense | species | Increases |
| 0 | 2 | Clostridium merdae | species | Increases |
| 0 | 2 | Clostridium minihomine | species | Increases |
| 0 | 2 | Clostridium moniliforme | species | Increases |
| 0 | 2 | Clostridium nigeriense | species | Increases |
| 0 | 2 | Clostridium nitrophenolicum | species | Increases |
| 0 | 2 | Clostridium novyi | species | Increases |
| 0 | 2 | Clostridium oceanicum | species | Increases |
| 0 | 2 | Clostridium oryzae | species | Increases |
| 0 | 2 | Clostridium paraputrificum | species | Increases |
| 0 | 2 | Clostridium paridis | species | Increases |
| 0 | 2 | Clostridium phoceensis | species | Increases |
| 0 | 2 | Clostridium polyendosporum | species | Increases |
| 0 | 2 | Clostridium porci | species | Increases |
| 0 | 2 | Clostridium putrefaciens | species | Increases |
| 0 | 2 | Clostridium quinii | species | Increases |
| 0 | 2 | Clostridium rhizosphaerae | species | Increases |
| 0 | 2 | Clostridium ruminantium | species | Increases |
| 0 | 2 | Clostridium sardiniense | species | Increases |
| 0 | 2 | Clostridium sartagoforme | species | Increases |
| 0 | 2 | Clostridium saudiense | species | Increases |
| 0 | 2 | Clostridium schirmacherense | species | Increases |
| 0 | 2 | Clostridium segne | species | Increases |
| 0 | 2 | Clostridium senegalense | species | Increases |
| 0 | 2 | Clostridium sp. AP-15 | species | Increases |
| 0 | 2 | Clostridium subterminale | species | Increases |
| 0 | 2 | Clostridium sulfidigenes | species | Increases |
| 0 | 2 | Clostridium swellfunianum | species | Increases |
| 0 | 2 | Clostridium tagluense | species | Increases |
| 0 | 2 | Clostridium tarantellae | species | Increases |
| 0 | 2 | Clostridium tepidiprofundi | species | Increases |
| 0 | 2 | Clostridium tepidum | species | Increases |
| 0 | 2 | Clostridium tertium | species | Increases |
| 0 | 2 | Clostridium tetanomorphum | species | Increases |
| 0 | 2 | Clostridium thermoamylolyticum | species | Increases |
| 0 | 2 | Clostridium thermobutyricum | species | Increases |
| 0 | 2 | Clostridium thermopalmarium | species | Increases |
| 0 | 2 | Clostridium thiosulfatireducens | species | Increases |
| 0 | 2 | Clostridium tunisiense | species | Increases |
| 0 | 2 | Clostridium uliginosum | species | Increases |
| 0 | 2 | Clostridium vincentii | species | Increases |
| 0 | 2 | Clostridium vulturis | species | Increases |
| 0 | 2 | Faecalibacterium hattorii | species | Increases |
| 0 | 2 | Faecalibacterium hominis (ex Afrizal et al. 2022) | species | Increases |
| 0 | 2 | Faecalibacterium longum | species | Increases |
| 0 | 2 | Faecalispora jeddahensis | species | Increases |
| 0 | 2 | Streptococcus azizii | species | Increases |
| 0 | 2 | Streptococcus caballi | species | Increases |
| 0 | 2 | Streptococcus castoreus | species | Increases |
| 0 | 2 | Streptococcus chenjunshii | species | Increases |
| 0 | 2 | Streptococcus chosunense | species | Increases |
| 0 | 2 | Streptococcus criceti | species | Increases |
| 0 | 2 | Streptococcus cuniculipharyngis | species | Increases |
| 0 | 2 | Streptococcus danieliae | species | Increases |
| 0 | 2 | Streptococcus dentapri | species | Increases |
| 0 | 2 | Streptococcus dentasini | species | Increases |
| 0 | 2 | Streptococcus dentirousetti | species | Increases |
| 0 | 2 | Streptococcus devriesei | species | Increases |
| 0 | 2 | Streptococcus didelphis | species | Increases |
| 0 | 2 | Streptococcus downei | species | Increases |
| 0 | 2 | Streptococcus entericus | species | Increases |
| 0 | 2 | Streptococcus fryi | species | Increases |
| 0 | 2 | Streptococcus gallinaceus | species | Increases |
| 0 | 2 | Streptococcus halichoeri | species | Increases |
| 0 | 2 | Streptococcus halotolerans | species | Increases |
| 0 | 2 | Streptococcus henryi | species | Increases |
| 0 | 2 | Streptococcus hongkongensis | species | Increases |
| 0 | 2 | Streptococcus hyointestinalis | species | Increases |
| 0 | 2 | Streptococcus hyovaginalis | species | Increases |
| 0 | 2 | Streptococcus ictaluri | species | Increases |
| 0 | 2 | Streptococcus macacae | species | Increases |
| 0 | 2 | Streptococcus marimammalium | species | Increases |
| 0 | 2 | Streptococcus marmotae | species | Increases |
| 0 | 2 | Streptococcus massiliensis | species | Increases |
| 0 | 2 | Streptococcus minor | species | Increases |
| 0 | 2 | Streptococcus orisasini | species | Increases |
| 0 | 2 | Streptococcus orisratti | species | Increases |
| 0 | 2 | Streptococcus orisuis | species | Increases |
| 0 | 2 | Streptococcus ovis | species | Increases |
| 0 | 2 | Streptococcus panodentis | species | Increases |
| 0 | 2 | Streptococcus pantholopis | species | Increases |
| 0 | 2 | Streptococcus pasteuri | species | Increases |
| 0 | 2 | Streptococcus peroris | species | Increases |
| 0 | 2 | Streptococcus phocae | species | Increases |
| 0 | 2 | Streptococcus plurextorum | species | Increases |
| 0 | 2 | Streptococcus porci | species | Increases |
| 0 | 2 | Streptococcus porcorum | species | Increases |
| 0 | 2 | Streptococcus respiraculi | species | Increases |
| 0 | 2 | Streptococcus rupicaprae | species | Increases |
| 0 | 2 | Streptococcus seminale | species | Increases |
| 0 | 2 | Streptococcus shenyangsis | species | Increases |
| 0 | 2 | Streptococcus sinensis | species | Increases |
| 0 | 2 | Streptococcus symci | species | Increases |
| 0 | 2 | Streptococcus thoraltensis | species | Increases |
| 0 | 2 | Streptococcus timonensis | species | Increases |
| 0 | 2 | Streptococcus troglodytidis | species | Increases |
| 0 | 2 | Streptococcus vaginalis | species | Increases |
| 0 | 2 | Streptococcus viridans | species | Increases |
| 0 | 2 | Streptococcus vulneris | species | Increases |
| 0 | 2 | Streptococcus xiaochunlingii | species | Increases |
| 0 | 2 | Streptococcus thermophilus | species | Increases |
| 1 | 0 | [Eubacterium] siraeum | species | Increases |
| 1 | 2 | Bacteroides intestinalis | species | Increases |
| 1 | 0 | Roseburia intestinalis | species | Increases |
| 0 | 2 | Streptococcus parasanguinis | species | Increases |
| 0 | 3 | Lactobacillus acidophilus | species | Increases |
| 0 | 3 | Lactobacillus paragasseri | species | Increases |
| 1 | 1 | Bifidobacterium pseudocatenulatum | species | Increases |
| 0 | 3 | Lactobacillus jensenii | species | Increases |
| 0 | 3 | Lactobacillus gasseri | species | Increases |
| 0 | 2 | Faecalibacterium duncaniae | species | Increases |
| 1 | 2 | Bifidobacterium adolescentis | species | Increases |
| 0 | 2 | Streptococcus salivarius | species | Increases |
| 1 | 3 | Bacteroides ovatus | species | Increases |
| 0 | 3 | [Eubacterium] cellulosolvens | species | Increases |
| 0 | 3 | [Lactobacillus] rogosae | species | Increases |
| 0 | 3 | Candidatus Eubacterium faecale | species | Increases |
| 0 | 3 | Candidatus Eubacterium faecavium | species | Increases |
| 0 | 3 | Candidatus Eubacterium faecipullorum | species | Increases |
| 0 | 3 | Eubacterium barkeri | species | Increases |
| 0 | 3 | Eubacterium coprostanoligenes | species | Increases |
| 0 | 3 | Eubacterium multiforme | species | Increases |
| 0 | 3 | Eubacterium oxidoreducens | species | Increases |
| 0 | 3 | Eubacterium plexicaudatum | species | Increases |
| 0 | 3 | Eubacterium pyruvativorans | species | Increases |
| 0 | 3 | Eubacterium ramulus | species | Increases |
| 0 | 3 | Eubacterium rangiferina | species | Increases |
| 0 | 3 | Eubacterium ruminantium | species | Increases |
| 0 | 3 | Eubacterium segne | species | Increases |
| 0 | 3 | Eubacterium uniforme | species | Increases |
| 0 | 3 | Eubacterium xylanophilum | species | Increases |
| 0 | 3 | Lactobacillus alvei | species | Increases |
| 0 | 3 | Lactobacillus animata | species | Increases |
| 0 | 3 | Lactobacillus apis | species | Increases |
| 0 | 3 | Lactobacillus bombicola | species | Increases |
| 0 | 3 | Lactobacillus brevisimilis | species | Increases |
| 0 | 3 | Lactobacillus equicursoris | species | Increases |
| 0 | 3 | Lactobacillus faeni | species | Increases |
| 0 | 3 | Lactobacillus fornicalis | species | Increases |
| 0 | 3 | Lactobacillus gallinarum | species | Increases |
| 0 | 3 | Lactobacillus gigeriorum | species | Increases |
| 0 | 3 | Lactobacillus guizhouensis | species | Increases |
| 0 | 3 | Lactobacillus hamsteri | species | Increases |
| 0 | 3 | Lactobacillus helsingborgensis | species | Increases |
| 0 | 3 | Lactobacillus hominis | species | Increases |
| 0 | 3 | Lactobacillus intermedius | species | Increases |
| 0 | 3 | Lactobacillus japonicus | species | Increases |
| 0 | 3 | Lactobacillus kalixensis | species | Increases |
| 0 | 3 | Lactobacillus kitasatonis | species | Increases |
| 0 | 3 | Lactobacillus kullabergensis | species | Increases |
| 0 | 3 | Lactobacillus leichmannii | species | Increases |
| 0 | 3 | Lactobacillus letivazi | species | Increases |
| 0 | 3 | Lactobacillus mulieris | species | Increases |
| 0 | 3 | Lactobacillus panisapium | species | Increases |
| 0 | 3 | Lactobacillus pasteurii | species | Increases |
| 0 | 3 | Lactobacillus psittaci | species | Increases |
| 0 | 3 | Lactobacillus rodentium | species | Increases |
| 0 | 3 | Lactobacillus selangorensis | species | Increases |
| 0 | 3 | Lactobacillus terrae | species | Increases |
| 0 | 3 | Lactobacillus delbrueckii | species | Increases |
| 1 | 1 | Collinsella aerofaciens | species | Increases |
| 0 | 2 | Bifidobacterium longum | species | Increases |
| 1 | 2 | Bifidobacterium breve | species | Increases |
| 0 | 2 | Faecalibacterium prausnitzii | species | Increases |
| 0 | 3 | Eubacterium ventriosum | species | Increases |
| 0 | 2 | Streptococcus anginosus group | species group | Increases |
| 0 | 2 | Streptococcus dysgalactiae group | species group | Increases |
| 0 | 3 | Lactobacillus casei group | species group | Increases |
| 0 | 1 | Segatella copri DSM 18205 | strain | Decreases |
| 0 | 1 | Akkermansia muciniphila ATCC BAA-835 | strain | Decreases |
| 0 | 1 | Phocaeicola plebeius DSM 17135 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus 274-1D4 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus CL09T03C04 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus dnLKV7 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus PC510 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus RJ2L3 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus str. 3775 SL(B) 10 (iv) | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus str. 3775 SR(B) 19 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus str. 3975 RP4 | strain | Decreases |
| 0 | 1 | Phocaeicola vulgatus ATCC 8482 | strain | Decreases |
| 0 | 1 | Bacteroides ovatus V975 | strain | Increases |
| 0 | 1 | [Eubacterium] siraeum 70/3 | strain | Increases |
| 0 | 1 | [Eubacterium] siraeum DSM 15702 | strain | Increases |
| 0 | 1 | [Eubacterium] siraeum V10Sc8a | strain | Increases |
| 0 | 1 | Bacteroides intestinalis DSM 17393 | strain | Increases |
| 0 | 1 | Bacteroides ovatus 3_8_47FAA | strain | Increases |
| 0 | 1 | Bacteroides ovatus ATCC 8483 | strain | Increases |
| 0 | 1 | Bacteroides ovatus CL02T12C04 | strain | Increases |
| 0 | 1 | Bacteroides ovatus CL03T12C18 | strain | Increases |
| 0 | 1 | Bacteroides ovatus SD CMC 3f | strain | Increases |
| 0 | 1 | Bacteroides ovatus str. 3725 D1 iv | strain | Increases |
| 0 | 1 | Bifidobacterium pseudocatenulatum IPLA36007 | strain | Increases |
| 0 | 1 | Clostridium sp. ASF502 | strain | Increases |
| 0 | 1 | Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 | strain | Increases |
| 0 | 1 | Roseburia intestinalis L1-82 | strain | Increases |
| 0 | 1 | Roseburia intestinalis XB6B4 | strain | Increases |
| 0 | 1 | Roseburia intestinalis M50/1 | strain | Increases |
| 0 | 1 | Ruminiclostridium cellobioparum subsp. termitidis | subspecies | Increases |
| 1 | 0 | Bifidobacterium longum subsp. infantis | subspecies | Increases |
A higher number indicates impact on more bacteria associated with the condition and confidence on the impact.
We have X bacteria high and Y low reported. We find that the modifier reduces some and increases other of these two groups. We just tally: X|reduces + Y|Increase = Positive X|increases + Y|decrease = Negative.
Benefit Ratio:
Numbers above 0 have increasing positive effect.
Numbers below 0 have increasing negative effect.
| Condition | Positive Impact | Negative Impact | Benefit Ratio Impact |
|---|---|---|---|
| Abdominal Aortic Aneurysm | 0.2 | 0.1 | 1 |
| Acne | 2.3 | 1.6 | 0.44 |
| ADHD | 4 | 3.7 | 0.08 |
| Age-Related Macular Degeneration and Glaucoma | 0.5 | 1.3 | -1.6 |
| Allergic Rhinitis (Hay Fever) | 5.3 | 3.2 | 0.66 |
| Allergies | 9.9 | 8.5 | 0.16 |
| Allergy to milk products | 2.2 | 4.1 | -0.86 |
| Alopecia (Hair Loss) | 0.5 | 2.8 | -4.6 |
| Alzheimer's disease | 11.3 | 10.7 | 0.06 |
| Amyotrophic lateral sclerosis (ALS) Motor Neuron | 4.2 | 4 | 0.05 |
| Ankylosing spondylitis | 6.7 | 3.2 | 1.09 |
| Anorexia Nervosa | 4.7 | 2.6 | 0.81 |
| Antiphospholipid syndrome (APS) | 0.3 | 1.2 | -3 |
| Asthma | 5.5 | 7.3 | -0.33 |
| Atherosclerosis | 4.8 | 4.8 | 0 |
| Atrial fibrillation | 3.2 | 6.7 | -1.09 |
| Autism | 12.9 | 15.1 | -0.17 |
| Autoimmune Disease | 3.1 | 0.7 | 3.43 |
| Barrett esophagus cancer | 1.1 | 0.9 | 0.22 |
| benign prostatic hyperplasia | 1.6 | 1.6 | |
| Biofilm | 1.3 | 1.4 | -0.08 |
| Bipolar Disorder | 3.9 | 2.3 | 0.7 |
| Brain Trauma | 2.9 | 2.4 | 0.21 |
| Breast Cancer | 1.7 | 1.8 | -0.06 |
| Cancer (General) | 3.9 | 0.3 | 12 |
| Carcinoma | 5.1 | 4.3 | 0.19 |
| Celiac Disease | 6.5 | 4.5 | 0.44 |
| Cerebral Palsy | 2 | 1.6 | 0.25 |
| Chronic Fatigue Syndrome | 6.3 | 5.3 | 0.19 |
| Chronic Kidney Disease | 4.9 | 1.8 | 1.72 |
| Chronic Lyme | 0.6 | 0.6 | |
| Chronic Obstructive Pulmonary Disease (COPD) | 4.6 | 4 | 0.15 |
| Chronic Urticaria (Hives) | 2.6 | 3.1 | -0.19 |
| Coagulation / Micro clot triggering bacteria | 4.5 | 0.5 | 8 |
| Cognitive Function | 4.3 | 4.8 | -0.12 |
| Colorectal Cancer | 9.6 | 7.4 | 0.3 |
| Constipation | 5.4 | 1.7 | 2.18 |
| Coronary artery disease | 5.4 | 1.9 | 1.84 |
| COVID-19 | 18.5 | 10.8 | 0.71 |
| Crohn's Disease | 10.9 | 9.5 | 0.15 |
| Cushing's Syndrome (hypercortisolism) | 0.2 | 0.5 | -1.5 |
| cystic fibrosis | 3 | 3 | |
| d-lactic acidosis (one form of brain fog) | 0.3 | 1.2 | -3 |
| deep vein thrombosis | 4.4 | 2.6 | 0.69 |
| Denture Wearers Oral Shifts | 1 | 1.9 | -0.9 |
| Depression | 18.8 | 15.8 | 0.19 |
| Dermatomyositis | 2.1 | 0.6 | 2.5 |
| Eczema | 6.2 | 2.7 | 1.3 |
| Endometriosis | 4.6 | 5.2 | -0.13 |
| Eosinophilic Esophagitis | 2.2 | 0.6 | 2.67 |
| Epilepsy | 3.4 | 6.6 | -0.94 |
| erectile dysfunction | 1.8 | 2.1 | -0.17 |
| Fibromyalgia | 3.1 | 3.5 | -0.13 |
| Functional constipation / chronic idiopathic constipation | 8 | 8 | 0 |
| gallstone disease (gsd) | 3.7 | 2.2 | 0.68 |
| Gastroesophageal reflux disease (Gerd) including Barrett's esophagus | 2.9 | 2.3 | 0.26 |
| Generalized anxiety disorder | 5.8 | 3.2 | 0.81 |
| giant cell arteritis | 0.7 | 0.4 | 0.75 |
| Glioblastoma | 1.2 | 0.7 | 0.71 |
| Gout | 4.7 | 1.9 | 1.47 |
| Graves' disease | 7.1 | 2.8 | 1.54 |
| Gulf War Syndrome | 2.2 | 2.8 | -0.27 |
| Halitosis | 2.8 | 2 | 0.4 |
| Hashimoto's thyroiditis | 2.8 | 3.8 | -0.36 |
| Heart Failure | 6.5 | 5.2 | 0.25 |
| hemorrhagic stroke | 0.8 | 1.2 | -0.5 |
| Hidradenitis Suppurativa | 1.1 | 1.7 | -0.55 |
| High Histamine/low DAO | 1.5 | 1.6 | -0.07 |
| hypercholesterolemia (High Cholesterol) | 0.8 | 1.3 | -0.63 |
| hyperglycemia | 3.2 | 2.1 | 0.52 |
| Hyperlipidemia (High Blood Fats) | 3.1 | 2.8 | 0.11 |
| hypersomnia | 1.8 | 0 | 0 |
| hypertension (High Blood Pressure | 8.8 | 6.4 | 0.38 |
| Hypothyroidism | 3.1 | 1 | 2.1 |
| Hypoxia | 2 | 2.8 | -0.4 |
| IgA nephropathy (IgAN) | 4.5 | 2.7 | 0.67 |
| Inflammatory Bowel Disease | 14.9 | 7.7 | 0.94 |
| Insomnia | 5.4 | 5.6 | -0.04 |
| Intelligence | 1.4 | 3.1 | -1.21 |
| Intracranial aneurysms | 3.7 | 2.6 | 0.42 |
| Irritable Bowel Syndrome | 10.5 | 8.1 | 0.3 |
| ischemic stroke | 3.3 | 4.9 | -0.48 |
| Juvenile idiopathic arthritis | 0.5 | 0.5 | |
| Liver Cirrhosis | 7.6 | 8.5 | -0.12 |
| Long COVID | 15.6 | 12 | 0.3 |
| Low bone mineral density | 2 | 0.7 | 1.86 |
| Lung Cancer | 3.5 | 1.2 | 1.92 |
| Lymphoma | 0.9 | 0.9 | |
| Mast Cell Issues / mastitis | 2.4 | 2.1 | 0.14 |
| ME/CFS with IBS | 1.4 | 1 | 0.4 |
| ME/CFS without IBS | 0.9 | 1.2 | -0.33 |
| membranous nephropathy | 0.5 | 0.3 | 0.67 |
| Menopause | 1.7 | 1.3 | 0.31 |
| Metabolic Syndrome | 12.9 | 9.9 | 0.3 |
| Mood Disorders | 15.8 | 17.5 | -0.11 |
| multiple chemical sensitivity [MCS] | 0.8 | 1.3 | -0.63 |
| Multiple Sclerosis | 8.1 | 8.4 | -0.04 |
| Multiple system atrophy (MSA) | 1.3 | 1.5 | -0.15 |
| myasthenia gravis | 2.7 | 1.4 | 0.93 |
| neuropathic pain | 2.2 | 2.2 | |
| Neuropathy (all types) | 3 | 3.1 | -0.03 |
| neuropsychiatric disorders (PANDAS, PANS) | 1.1 | 0.3 | 2.67 |
| Nonalcoholic Fatty Liver Disease (nafld) Nonalcoholic | 10 | 7.6 | 0.32 |
| NonCeliac Gluten Sensitivity | 1.7 | 3 | -0.76 |
| Obesity | 13.7 | 13.9 | -0.01 |
| obsessive-compulsive disorder | 5.8 | 4 | 0.45 |
| Osteoarthritis | 3.5 | 2.2 | 0.59 |
| Osteoporosis | 4.9 | 3.6 | 0.36 |
| pancreatic cancer | 1.9 | 2.1 | -0.11 |
| Parkinson's Disease | 14.2 | 12.8 | 0.11 |
| Peanut Allergy | 0 | 0 | |
| Polycystic ovary syndrome | 8.5 | 5.9 | 0.44 |
| Postural orthostatic tachycardia syndrome | 0.7 | 0.7 | 0 |
| Premenstrual dysphoric disorder | 0.6 | 2.5 | -3.17 |
| primary biliary cholangitis | 3 | 2.6 | 0.15 |
| Primary sclerosing cholangitis | 5 | 1.8 | 1.78 |
| Psoriasis | 2 | 6.8 | -2.4 |
| rheumatoid arthritis (RA),Spondyloarthritis (SpA) | 9.9 | 10.6 | -0.07 |
| Rosacea | 3.5 | 2.7 | 0.3 |
| Schizophrenia | 8.8 | 9 | -0.02 |
| scoliosis | 1.4 | 1.3 | 0.08 |
| sensorineural hearing loss | 0 | 0.2 | 0 |
| Sjögren syndrome | 4 | 2.5 | 0.6 |
| Sleep Apnea | 2.9 | 3.7 | -0.28 |
| Slow gastric motility / Gastroparesis | 1.2 | 1.2 | 0 |
| Small Intestinal Bacterial Overgrowth (SIBO) | 0.9 | 2.3 | -1.56 |
| Stress / posttraumatic stress disorder | 4.5 | 3.8 | 0.18 |
| Systemic Lupus Erythematosus | 5.2 | 6.9 | -0.33 |
| Tic Disorder | 2.5 | 2.6 | -0.04 |
| Tourette syndrome | 1 | 0.7 | 0.43 |
| Type 1 Diabetes | 8.8 | 5.4 | 0.63 |
| Type 2 Diabetes | 14.6 | 12.2 | 0.2 |
| Ulcerative colitis | 9.2 | 9.3 | -0.01 |
| Unhealthy Ageing | 5 | 2.1 | 1.38 |
| Vitiligo | 1.2 | 2.2 | -0.83 |
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