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National Library of Medicine Citations for Stress / posttraumatic stress disorder

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: PerplexityKagi LabsYou

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Gammaproteobacteria ⬆️
Francisella tularensis ⬆️
Enterobacteriaceae ⬆️ ⬆️
Citrobacter ⬆️
Shigella ⬆️
Escherichia coli ⬆️
Sphingomonas ⬆️
Verrucomicrobiota ⬆️ ⬇️ ⬇️
Lentisphaerota ⬇️ ⬇️
Akkermansia ⬆️
Akkermansia muciniphila ⬇️
Porphyromonas ⬆️
Parabacteroides ⬆️ ⬇️
Bacteroides ⬆️ ⬇️
Bacteroides salyersiae ⬇️
Actinomycetota ⬇️ ⬇️ ⬇️
Mycoplasmatota ⬇️
Bacillota ⬇️
Peptoniphilus ⬆️ ⬆️
Dehalobacterium ⬆️
Oscillospira ⬇️
Faecalibacterium ⬇️
Faecalibacterium prausnitzii ⬇️
Clostridium ⬆️
Peptostreptococcus ⬆️ ⬆️
Christensenella ⬆️
Lachnospiraceae ⬇️ ⬇️
Dorea ⬆️
Anaerostipes ⬆️
Roseburia ⬆️ ⬇️
Coprococcus ⬇️
Erysipelotrichaceae ⬆️
Bulleidia ⬆️
Solobacterium moorei ⬆️
Coprobacillus ⬆️
Turicibacter ⬆️
Acidaminococcus ⬆️ ⬆️
Phascolarctobacterium ⬇️
Staphylococcus ⬆️ ⬆️ ⬆️ ⬆️
Staphylococcus intermedius ⬆️
Lactobacillus ⬆️
Lactiplantibacillus plantarum ⬇️
Enterococcus ⬆️ ⬆️ ⬆️
Actinomycetes ⬇️
Bifidobacterium ⬆️ ⬇️ ⬇️
Corynebacterium ⬆️
Rhodococcus ⬆️
Adlercreutzia ⬇️
Eggerthella lenta ⬇️
Coriobacteriaceae ⬆️
Atopobium ⬇️
Coriobacterium ⬇️
Collinsella ⬇️
Anaeroplasma ⬇️
Fusobacterium ⬆️ ⬆️
Methanobrevibacter ⬆️
Rhodococcus ⬆️

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetes (NCBI:1760 ) Low n/a Distribution    πŸ“š PubMed
class Gammaproteobacteria (NCBI:1236 ) High n/a Distribution    πŸ“š PubMed
family Coriobacteriaceae (NCBI:84107 ) High n/a Distribution    πŸ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    πŸ“š PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    πŸ“š PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    πŸ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    πŸ“š PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    πŸ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    πŸ“š PubMed
genus Acidaminococcus (NCBI:904 ) High n/a Distribution    πŸ“š PubMed
genus Acidaminococcus (NCBI:904 ) High n/a Distribution    πŸ“š PubMed
genus Adlercreutzia (NCBI:447020 ) Low n/a Distribution    πŸ“š PubMed
genus Akkermansia (NCBI:239934 ) High n/a Distribution    πŸ“š PubMed
genus Anaeroplasma (NCBI:2086 ) Low n/a Distribution    πŸ“š PubMed
genus Anaerostipes (NCBI:207244 ) High n/a Distribution    πŸ“š PubMed
genus Atopobium (NCBI:1380 ) Low n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    πŸ“š PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    πŸ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    πŸ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    πŸ“š PubMed
genus Bulleidia (NCBI:118747 ) High n/a Distribution    πŸ“š PubMed
genus Christensenella (NCBI:990721 ) High n/a Distribution    πŸ“š PubMed
genus Citrobacter (NCBI:544 ) High n/a Distribution    πŸ“š PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    πŸ“š PubMed
genus Collinsella (NCBI:102106 ) Low n/a Distribution    πŸ“š PubMed
genus Coprobacillus (NCBI:100883 ) High n/a Distribution    πŸ“š PubMed
genus Coprococcus (NCBI:33042 ) Low n/a Distribution    πŸ“š PubMed
genus Coriobacterium (NCBI:33870 ) Low n/a Distribution    πŸ“š PubMed
genus Corynebacterium (NCBI:1716 ) High n/a Distribution    πŸ“š PubMed
genus Dehalobacterium (NCBI:51514 ) High n/a Distribution    πŸ“š PubMed
genus Dorea (NCBI:189330 ) High n/a Distribution    πŸ“š PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    πŸ“š PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    πŸ“š PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    πŸ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    πŸ“š PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    πŸ“š PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    πŸ“š PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    πŸ“š PubMed
genus Methanobrevibacter (NCBI:2172 ) High n/a Distribution    πŸ“š PubMed
genus Oscillospira (NCBI:119852 ) Low n/a Distribution    πŸ“š PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    πŸ“š PubMed
genus Parabacteroides (NCBI:375288 ) Low n/a Distribution    πŸ“š PubMed
genus Peptoniphilus (NCBI:162289 ) High n/a Distribution    πŸ“š PubMed
genus Peptoniphilus (NCBI:162289 ) High n/a Distribution    πŸ“š PubMed
genus Peptostreptococcus (NCBI:1257 ) High n/a Distribution    πŸ“š PubMed
genus Peptostreptococcus (NCBI:1257 ) High n/a Distribution    πŸ“š PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low n/a Distribution    πŸ“š PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    πŸ“š PubMed
genus Rhodococcus (NCBI:1827 ) High n/a Distribution    πŸ“š PubMed
genus Rhodococcus (NCBI:1661425 ) High n/a Distribution    πŸ“š PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    πŸ“š PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    πŸ“š PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    πŸ“š PubMed
genus Sphingomonas (NCBI:13687 ) High n/a Distribution    πŸ“š PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    πŸ“š PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    πŸ“š PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    πŸ“š PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    πŸ“š PubMed
genus Turicibacter (NCBI:191303 ) High n/a Distribution    πŸ“š PubMed
phylum Actinomycetota (NCBI:201174 ) Low n/a Distribution    πŸ“š PubMed
phylum Actinomycetota (NCBI:201174 ) Low n/a Distribution    πŸ“š PubMed
phylum Actinomycetota (NCBI:201174 ) Low n/a Distribution    πŸ“š PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    πŸ“š PubMed
phylum Lentisphaerota (NCBI:256845 ) Low n/a Distribution    πŸ“š PubMed
phylum Lentisphaerota (NCBI:256845 ) Low n/a Distribution    πŸ“š PubMed
phylum Mycoplasmatota (NCBI:544448 ) Low n/a Distribution    πŸ“š PubMed
phylum Verrucomicrobiota (NCBI:74201 ) High n/a Distribution    πŸ“š PubMed
phylum Verrucomicrobiota (NCBI:74201 ) Low n/a Distribution    πŸ“š PubMed
phylum Verrucomicrobiota (NCBI:74201 ) Low n/a Distribution    πŸ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    πŸ“š PubMed
species Bacteroides salyersiae (NCBI:291644 ) Low n/a Distribution    πŸ“š PubMed
species Eggerthella lenta (NCBI:84112 ) Low n/a Distribution    πŸ“š PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    πŸ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    πŸ“š PubMed
species Francisella tularensis (NCBI:263 ) High n/a Distribution    πŸ“š PubMed
species Lactiplantibacillus plantarum (NCBI:1590 ) Low n/a Distribution    πŸ“š PubMed
species Solobacterium moorei (NCBI:102148 ) High n/a Distribution    πŸ“š PubMed
species Staphylococcus intermedius (NCBI:1285 ) High n/a Distribution    πŸ“š PubMed

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