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National Library of Medicine Citations for Hashimoto's thyroiditis

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: PerplexityKagi LabsYou

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Alphaproteobacteria ⬇️
Pasteurellales ⬇️
Pasteurellaceae ⬇️
Yersinia enterocolitica ⬆️ ⬆️
Klebsiella ⬇️
Klebsiella pneumoniae ⬆️
Alcaligenaceae ⬇️ ⬇️
Ralstonia ⬆️
Sutterella ⬆️
Victivallis ⬇️
Verrucomicrobiales ⬇️
Verrucomicrobiaceae ⬇️
Akkermansia ⬆️ ⬇️
Alistipes ⬆️
Prevotella ⬆️ ⬇️
Bacteroides ⬆️ ⬆️ ⬆️ ⬇️
Bacteroides fragilis ⬆️
Actinomycetota ⬆️
Erysipelotrichia ⬆️
Peptococcaceae ⬇️
Faecalibacterium ⬇️
Subdoligranulum ⬆️
Ruminococcus ⬆️
Faecalibacterium prausnitzii ⬇️
Lactonifactor ⬆️
Intestinimonas ⬆️
Romboutsia ⬆️
Lachnospiraceae ⬆️ ⬆️
Lachnospira ⬇️
Roseburia ⬆️
Butyrivibrio ⬇️
Lachnoclostridium ⬇️ ⬇️
Lachnospiraceae incertae sedis ⬆️
Fusicatenibacter ⬆️
Blautia ⬆️
Dorea ⬆️
Anaerostipes ⬆️
[Ruminococcus] torques ⬆️ ⬇️
Anaerobutyricum hallii ⬆️
Turicibacter ⬆️
Phascolarctobacterium ⬆️
Veillonella ⬆️
Megamonas ⬇️
Bacillaceae ⬇️
Gemella ⬆️
Lactobacillaceae ⬇️
Lactobacillus ⬇️ ⬇️
Enterococcus ⬆️
Bifidobacterium ⬆️ ⬆️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️
Mycobacterium ⬆️
Mycobacterium avium ⬆️ ⬆️ ⬆️
Desulfovibrionales ⬇️
Desulfovibrionaceae ⬇️
Bilophila ⬇️
Helicobacter pylori ⬆️ ⬆️
Fusobacterium ⬆️
Blastocystis hominis ⬆️
Bacillus ⬆️

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Alphaproteobacteria (NCBI:28211 ) Low n/a Distribution    πŸ“š PubMed
class Erysipelotrichia (NCBI:526524 ) High n/a Distribution    πŸ“š PubMed
family Alcaligenaceae (NCBI:506 ) Low n/a Distribution    πŸ“š PubMed
family Bacillaceae (NCBI:186817 ) Low n/a Distribution    πŸ“š PubMed
family Desulfovibrionaceae (NCBI:194924 ) Low n/a Distribution    πŸ“š PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    πŸ“š PubMed
family Lactobacillaceae (NCBI:33958 ) Low n/a Distribution    πŸ“š PubMed
family Pasteurellaceae (NCBI:712 ) Low n/a Distribution    πŸ“š PubMed
family Peptococcaceae (NCBI:186807 ) Low n/a Distribution    πŸ“š PubMed
family Verrucomicrobiaceae (NCBI:203557 ) Low n/a Distribution    πŸ“š PubMed
genus Akkermansia (NCBI:239934 ) High n/a Distribution    πŸ“š PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    πŸ“š PubMed
genus Alistipes (NCBI:239759 ) High n/a Distribution    πŸ“š PubMed
genus Anaerostipes (NCBI:207244 ) High n/a Distribution    πŸ“š PubMed
genus Bacillus (NCBI:55087 ) High n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    πŸ“š PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    πŸ“š PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    πŸ“š PubMed
genus Bilophila (NCBI:35832 ) Low n/a Distribution    πŸ“š PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    πŸ“š PubMed
genus Butyrivibrio (NCBI:830 ) Low n/a Distribution    πŸ“š PubMed
genus Dorea (NCBI:189330 ) High n/a Distribution    πŸ“š PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    πŸ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    πŸ“š PubMed
genus Fusicatenibacter (NCBI:1407607 ) High n/a Distribution    πŸ“š PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    πŸ“š PubMed
genus Gemella (NCBI:1378 ) High n/a Distribution    πŸ“š PubMed
genus Intestinimonas (NCBI:1392389 ) High n/a Distribution    πŸ“š PubMed
genus Klebsiella (NCBI:570 ) Low n/a Distribution    πŸ“š PubMed
genus Lachnoclostridium (NCBI:1506553 ) Low n/a Distribution    πŸ“š PubMed
genus Lachnospira (NCBI:28050 ) Low n/a Distribution    πŸ“š PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    πŸ“š PubMed
genus Lactonifactor (NCBI:420345 ) High n/a Distribution    πŸ“š PubMed
genus Megamonas (NCBI:158846 ) Low n/a Distribution    πŸ“š PubMed
genus Mycobacterium (NCBI:1763 ) High n/a Distribution    πŸ“š PubMed
genus Phascolarctobacterium (NCBI:33024 ) High n/a Distribution    πŸ“š PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    πŸ“š PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    πŸ“š PubMed
genus Ralstonia (NCBI:48736 ) High n/a Distribution    πŸ“š PubMed
genus Romboutsia (NCBI:1501226 ) High n/a Distribution    πŸ“š PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    πŸ“š PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    πŸ“š PubMed
genus Subdoligranulum (NCBI:292632 ) High n/a Distribution    πŸ“š PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    πŸ“š PubMed
genus Turicibacter (NCBI:191303 ) High n/a Distribution    πŸ“š PubMed
genus Veillonella (NCBI:29465 ) High n/a Distribution    πŸ“š PubMed
genus Victivallis (NCBI:172900 ) Low n/a Distribution    πŸ“š PubMed
no rank Lachnospiraceae incertae sedis (NCBI:2840493 ) High n/a Distribution    πŸ“š PubMed
order Desulfovibrionales (NCBI:213115 ) Low n/a Distribution    πŸ“š PubMed
order Pasteurellales (NCBI:135625 ) Low n/a Distribution    πŸ“š PubMed
order Verrucomicrobiales (NCBI:48461 ) Low n/a Distribution    πŸ“š PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    πŸ“š PubMed
species [Ruminococcus] torques (NCBI:33039 ) High n/a Distribution    πŸ“š PubMed
species [Ruminococcus] torques (NCBI:33039 ) Low n/a Distribution    πŸ“š PubMed
species Anaerobutyricum hallii (NCBI:39488 ) High n/a Distribution    πŸ“š PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    πŸ“š PubMed
species Blastocystis hominis (NCBI:12968 ) High n/a Distribution    πŸ“š PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    πŸ“š PubMed
species Helicobacter pylori (NCBI:210 ) High n/a Distribution    πŸ“š PubMed
species Klebsiella pneumoniae (NCBI:573 ) High n/a Distribution    πŸ“š PubMed
species Mycobacterium avium (NCBI:1764 ) High n/a Distribution    πŸ“š PubMed
species Yersinia enterocolitica (NCBI:630 ) High n/a Distribution    πŸ“š PubMed

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