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National Library of Medicine Citations for Osteoporosis

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: PerplexityKagi LabsYou

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Pseudomonadota ⬆️
Campylobacterota ⬆️
Fusobacteriota ⬆️
Deferribacterota ⬇️
Synergistota ⬇️
Escherichia ⬆️ ⬆️
Shigella ⬆️ ⬆️
Klebsiella ⬆️
Citrobacter amalonaticus ⬇️
Burkholderiales ⬇️
Oxalobacteraceae ⬆️
Akkermansia muciniphila ⬇️
Bacteroidota ⬆️ ⬆️
Bacteroidia ⬆️ ⬇️
Rikenellaceae ⬇️
Prevotellaceae ⬆️
Alistipes ⬇️
Alloprevotella ⬇️
Bacteroides ⬆️ ⬆️ ⬇️
Bacillota ⬇️
Ruminococcus ⬆️
Faecalibacterium ⬆️ ⬆️ ⬇️
Subdoligranulum ⬇️
Acetivibrio cellulolyticus ⬇️
Butyricicoccus ⬇️
Clostridium ⬆️
Candidatus Soleaferrea ⬆️
Peptostreptococcaceae ⬆️
Romboutsia ⬆️
Lachnospiraceae ⬆️
Dorea ⬇️
Anaerostipes ⬇️
Roseburia ⬆️
Blautia ⬇️ ⬇️ ⬇️
Erysipelotrichaceae ⬇️
Faecalibaculum ⬇️
Dialister ⬆️
Veillonella ⬆️ πŸ§ͺ 263244035 %ile
Megamonas ⬇️
Staphylococcus aureus ⬆️
Staphylococcus simulans ⬆️
Streptococcus ⬇️
Carnobacterium mobile ⬆️
Lactobacillus ⬆️ ⬆️ ⬆️ ⬆️ ⬇️
Lactiplantibacillus plantarum ⬆️
Actinomyces ⬆️ ⬆️
Bifidobacterium breve ⬇️
Bifidobacterium animalis ⬆️
Rhodococcus ⬆️
Eggerthella ⬆️ ⬆️
Deferribacteres ⬇️
Helicobacter ⬆️
Methanobrevibacter smithii ⬆️

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Bacteroidia (NCBI:200643 ) High n/a Distribution    πŸ“š PubMed
class Bacteroidia (NCBI:200643 ) Low n/a Distribution    πŸ“š PubMed
class Deferribacteres (NCBI:68337 ) Low n/a Distribution    πŸ“š PubMed
family Erysipelotrichaceae (NCBI:128827 ) Low n/a Distribution    πŸ“š PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    πŸ“š PubMed
family Oxalobacteraceae (NCBI:75682 ) High n/a Distribution    πŸ“š PubMed
family Peptostreptococcaceae (NCBI:186804 ) High n/a Distribution    πŸ“š PubMed
family Prevotellaceae (NCBI:171552 ) High n/a Distribution    πŸ“š PubMed
family Rikenellaceae (NCBI:171550 ) Low n/a Distribution    πŸ“š PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    πŸ“š PubMed
genus Actinomyces (NCBI:1654 ) High n/a Distribution    πŸ“š PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    πŸ“š PubMed
genus Alloprevotella (NCBI:1283313 ) Low n/a Distribution    πŸ“š PubMed
genus Anaerostipes (NCBI:207244 ) Low n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    πŸ“š PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    πŸ“š PubMed
genus Blautia (NCBI:572511 ) Low n/a Distribution    πŸ“š PubMed
genus Butyricicoccus (NCBI:580596 ) Low n/a Distribution    πŸ“š PubMed
genus Candidatus Soleaferrea (NCBI:1470353 ) High n/a Distribution    πŸ“š PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    πŸ“š PubMed
genus Dialister (NCBI:39948 ) High n/a Distribution    πŸ“š PubMed
genus Dorea (NCBI:189330 ) Low n/a Distribution    πŸ“š PubMed
genus Eggerthella (NCBI:84111 ) High n/a Distribution    πŸ“š PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    πŸ“š PubMed
genus Faecalibacterium (NCBI:216851 ) High n/a Distribution    πŸ“š PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    πŸ“š PubMed
genus Faecalibaculum (NCBI:1729679 ) Low n/a Distribution    πŸ“š PubMed
genus Helicobacter (NCBI:209 ) High n/a Distribution    πŸ“š PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    πŸ“š PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    πŸ“š PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    πŸ“š PubMed
genus Megamonas (NCBI:158846 ) Low n/a Distribution    πŸ“š PubMed
genus Rhodococcus (NCBI:1827 ) High n/a Distribution    πŸ“š PubMed
genus Romboutsia (NCBI:1501226 ) High n/a Distribution    πŸ“š PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    πŸ“š PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    πŸ“š PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    πŸ“š PubMed
genus Streptococcus (NCBI:1301 ) Low n/a Distribution    πŸ“š PubMed
genus Subdoligranulum (NCBI:292632 ) Low n/a Distribution    πŸ“š PubMed
genus Veillonella (NCBI:29465 ) High n/a Distribution    πŸ“š PubMed
order Burkholderiales (NCBI:80840 ) Low n/a Distribution    πŸ“š PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    πŸ“š PubMed
phylum Bacteroidota (NCBI:976 ) High n/a Distribution    πŸ“š PubMed
phylum Campylobacterota (NCBI:29547 ) High n/a Distribution    πŸ“š PubMed
phylum Deferribacterota (NCBI:200930 ) Low n/a Distribution    πŸ“š PubMed
phylum Fusobacteriota (NCBI:32066 ) High n/a Distribution    πŸ“š PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    πŸ“š PubMed
phylum Synergistota (NCBI:508458 ) Low n/a Distribution    πŸ“š PubMed
species Acetivibrio cellulolyticus (NCBI:35830 ) Low n/a Distribution    πŸ“š PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    πŸ“š PubMed
species Bifidobacterium animalis (NCBI:28025 ) High n/a Distribution    πŸ“š PubMed
species Bifidobacterium breve (NCBI:1685 ) Low n/a Distribution    πŸ“š PubMed
species Carnobacterium mobile (NCBI:2750 ) High n/a Distribution    πŸ“š PubMed
species Citrobacter amalonaticus (NCBI:35703 ) Low n/a Distribution    πŸ“š PubMed
species Lactiplantibacillus plantarum (NCBI:1590 ) High n/a Distribution    πŸ“š PubMed
species Methanobrevibacter smithii (NCBI:2173 ) High n/a Distribution    πŸ“š PubMed
species Staphylococcus aureus (NCBI:1280 ) High n/a Distribution    πŸ“š PubMed
species Staphylococcus simulans (NCBI:1286 ) High n/a Distribution    πŸ“š PubMed

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