[Clostridium] scindens Details: NCBI 29347, gram-negative or unknown [species]

| [Clostridium] scindens| ATCC 35704| CIP 106687| Clostridium scindens| Clostridium scindens Morris et al. 1985| DSM 5676| Eubacterium sp. (strain VPI 12708)| Eubacterium sp. VPI 12708| Eubacterium sp. VPI-12708| Eubacterium VPI-12708| JCM 6567| strain Bokkenheuser 19

1. Bile Acid Metabolism: Clostridium scindens plays a role in bile acid metabolism in the gut. It has the ability to convert primary bile acids, which are produced by the liver, into secondary bile acids through a process known as dehydroxylation. This metabolic activity can influence the composition of bile acids in the digestive system.

2. Impact on Host Metabolism: The metabolism of bile acids by Clostridium scindens has been linked to various physiological effects. Secondary bile acids, produced by the action of this bacterium, may have implications for host metabolism, lipid absorption, and energy balance. They can also interact with host receptors, influencing signaling pathways related to metabolism.

3. Influence on Inflammation and Immunity: Some studies suggest that the activities of Clostridium scindens in bile acid metabolism may have implications for inflammation and immune responses. The modulation of bile acid composition in the gut can influence the gut environment and potentially impact the host's immune system.

4. Potential Therapeutic Applications: Given its role in bile acid metabolism and potential effects on host health, Clostridium scindens has been explored for therapeutic applications. Research has investigated the use of this bacterium or its metabolites in the context of certain diseases, including metabolic disorders and inflammatory conditions.

Visuals of 32 Interactions with other bacteria of the same rank

The above data is from 1000 Healthy Individuals done using Shotgun(10 Millions reads) provide courtesy of Precision Biome.

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Other Sources for more information:

• Immune Epitope Database
• The NCBI taxonomy database
• UniProt
• Immune Epitope Taxonomy Database (IEDB)
• AI Engines For more Details: Perplexity  Kagi Labs  You 

More Information

Statistics

NCBI

Data Punk

End Products Produced

Lab Reporting

Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.

Desired Levels Suggestions for [Clostridium] scindens

• Lab Low and High are calculated using the formula that most labs use: Mean - 1.95 Standard Deviation to Mean + 1.95 Standard Deviation

These are values that are computed from lab specific samples and are in percentage

Lab	Frequency	Average	Median	Minimum	Maximum	Std.Dev.	Skew	25 - 75 Percentile	5 - 95 Percentile	Lab Ranges	Box-Plot-Whiskers	Harmonic Mean	Geometric Mean	Obs.
BiomeSightRdp	0.3704	0.0811	0.022	0.01	0.632	0.1937	0.9154	0.014 - 0.0278	0.0113 - 0.3615	-0.2966 - 0.4588	-0.0066 - 0.0484	0.0192	0.0265	10
CosmosId	0.4286	0.2158	0.017	0.001	2.831	0.7242	0.8235	0.0094 - 0.0542	0.001 - 0.9214	-1.1964 - 1.6279	-0.0578 - 0.1214	0.0049	0.0193	15
custom	0.4255	0.601	0.0694	0.0001	1.778	0.8013	1.9904	0.0063 - 1.778	0.0001 - 1.778	-0.9615 - 2.1636	-2.6513 - 4.4356	0.0009	0.0518	20
es-xenogene	0.8182	0.2518	0.154	0.068	1.566	0.3357	0.8739	0.13 - 0.234	0.0844 - 0.5154	-0.4028 - 0.9064	-0.026 - 0.39	0.1547	0.1819	18
Thorne	0.9524	0.0852	0.0495	0.0001	1.855	0.1745	0.6144	0.0353 - 0.0826	0.0136 - 0.2178	-0.2551 - 0.4255	-0.0356 - 0.1535	0.0071	0.0496	180
Thryve	0.7968	0.0652	0.0101	0.0001	4.4852	0.2473	0.6682	0.0044 - 0.0328	0.0016 - 0.2641	-0.417 - 0.5473	-0.0382 - 0.0755	0.0046	0.0132	988

External Reference Ranges for [Clostridium] scindens

[Clostridium] scindens (NCBI 29347) per million

Source of Ranges	Low Boundary	High Boundary	Low Boundary %age	High Boundary %age
Thorne (20/80%ile)	0	1.85	0	0.0002
XenoGene	0	5000	0	0.5
PrecisionBiome	0.0024019386619329453	0.07395559549331665	0	0
GanzImmun Diagostics	10	990000	0.001	99
Medivere	100	990000	0.01	99

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Data Contradictions — Limits of Certainity

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General Substance	Specific Substance	Effect
Amino Acid and similar	2-Amino-5-(carbamoylamino)pentanoic acid {Citrulline}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Amino Acid and similar	Conjugated Linoleic Acid {CLA}	1 Studies recorded. The consensus is Increases📓, Click for details.
Amino Acid and similar	L-Theanine {Theanine}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Amino Acid and similar	N,N,N-trimethylglycine {Betaine}	1 Studies recorded. The consensus is Increases📓, Click for details.
Antibiotics, Antivirals etc	clarithromycin [CFS]	1 Studies recorded. The consensus is Increases📓, Click for details.
Common and OTC Supplements	long-term, moderate-intensity exercise {exercise}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Common and OTC Supplements	sodium butyrate	1 Studies recorded. The consensus is Increases📓, Click for details.
Diet Style	dietary fiber	4 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	Fiber, total dietary	4 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	high-fat diets	1 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	High-fibre diet {Whole food diet}	4 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	high-saturated fat diet	1 Studies recorded. The consensus is Increases📓, Click for details.
Diet Style	hypocaloric hyperproteic diet	1 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	Slow digestible carbohydrates. {Low Glycemic}	6 Studies recorded. The consensus is Decreases📓, Click for details.
Diet Style	whole-grain diet	3 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	2-Amino-4-(methylthio)butanoic acid {Methionine}	1 Studies recorded. The consensus is Increases📓, Click for details.
Flavonoids, Polyphenols etc	3,5,7-trihydroxy flavanone-7-rhamnoglucoside {Hesperidin}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	Grape Polyphenols {Grape Flavonoids}	2 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	polyphenols	2 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	Quercetin-3-O-rutinoside {Rutin}	1 Studies recorded. The consensus is Increases📓, Click for details.
Flavonoids, Polyphenols etc	red wine polyphenols	1 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	resveratrol-pterostilbene {grapes, blueberries}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	resveratrol-pterostilbene x Quercetin {quercetin x resveratrol}	2 Studies recorded. The consensus is Decreases📓, Click for details.
Flavonoids, Polyphenols etc	theabrownin {theabrownin}	2 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	amaranthus {amaranth}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Aronia arbutifolia,Aronia melanocarpa {Chokeberry}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Asparagus officinalis {Asparagus}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Astragalus	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Avena sativa {Oats}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Avena sativa x Hordeum vulgare {barley,oat}	2 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Bertholletia excelsa {Brazilian nuts}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	blueberry	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Caffeine	2 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	Coffee	2 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	Cola aspartame {Diet Cola}	2 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	cranberry bean flour	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Curcuma longa {Turmeric}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Fagopyrum esculentum {Buckwheat}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	fruit	5 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	fruit/legume fibre	4 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	grapes	2 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	green tea	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Grifola frondosa {Hen of the Woods Mushroom}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Helianthus annuus {Sunflower}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	henopodium quinoa {Quinoa}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Honey {Honey }	1 Studies recorded. The consensus is Decreases👶, Click for details.
Food (excluding seasonings)	Hordeum vulgare {Barley}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	nuts	2 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Oryza sativa {Rice}	1 Studies recorded. The consensus is Increases👶, Click for details.
Food (excluding seasonings)	Outer Layers of Triticum aestivum {Wheat Bran}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	pectin {pectin}	2 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Pleurotus ostreatus {Oyster mushroom}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	pseudo-cereals {amaranth,quinoa, taro,buckwheat}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Punica granatum {pomegranate}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	red wine	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	Rheum × hybridum {Rhubarb}	2 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	Sus domesticus {Pork}	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	tea	2 Studies recorded. The consensus is Increases👶📓, Click for details.
Food (excluding seasonings)	vegetable	1 Studies recorded. The consensus is Decreases📓, Click for details.
Food (excluding seasonings)	walnuts	1 Studies recorded. The consensus is Increases📓, Click for details.
Food (excluding seasonings)	wheat	1 Studies recorded. The consensus is Increases📓, Click for details.
Food Preservatives	Polyethylene oxide sorbitan mono-oleate {Polysorbate 80}	1 Studies recorded. The consensus is Increases👶, Click for details.
Herb or Spice	5,6-dihydroxy-7-O-glucuronide flavone {Baicalin }	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Bixa orellana {annatto }	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Cannabis sativa {Marijuana}	2 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Citrus Fruit Extract	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Curcuma amada {Mango ginger}	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Dendrobium officinale Kimura {Tiepishihu}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Diferuloylmethane {Curcumin}	1 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	Panax ... {Ginseng}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Rhubarb x Peony {Rhubarb Peony Decoction}	2 Studies recorded. The consensus is Increases📓, Click for details.
Herb or Spice	rosmarinus officinalis {rosemary}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	terpenophenolics {cannabinoids}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Herb or Spice	Ulmus rubra {slippery elm}	2 Studies recorded. The consensus is Increases👶, Click for details.
Miscellaneous, food additives, and other odd items	bismuth subsalicylate {Pepto-Bismol}	1 Studies recorded. The consensus is Increases📓, Click for details.
Not Classified	Nitrogen Oxide x Particulate Matter {Urban air pollutant}	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	(2->1)-beta-D-fructofuranan {Inulin}	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	Amorphophallus konjac {konjac}	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	cellulose	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	Human milk oligosaccharides (prebiotic, Holigos, Stachyose)	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	oligosaccharides {oligosaccharides}	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	resistant starch	1 Studies recorded. The consensus is Increases📓, Click for details.
Prebiotics and similar	xylooligosaccharide	1 Studies recorded. The consensus is Increases📓, Click for details.
Prescription - Other	atorvastatin (prescription)	1 Studies recorded. The consensus is Increases📓, Click for details.
Prescription - Other	heparin	1 Studies recorded. The consensus is Decreases📓, Click for details.
Prescription - Other	monensin sodium salt,(prescription)	1 Studies recorded. The consensus is Decreases📓, Click for details.
Prescription - Other	risperidone,(prescription)	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Akkermansia muciniphila {Pendulum Probiotic}	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bacillus	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bacillus subtilis {B.Subtilis }	2 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bacillus subtilis,lactobacillus acidophilus	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bacillus,lactobacillus,streptococcus,saccharomyces probiotic	2 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bifidobacterium adolescentis {B. adolescentis}	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	bifidobacterium longum,lactobacillus helveticus	1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics	Lacticaseibacillus rhamnosus {l. rhamnosus}	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	Lactobacillus gasseri {L.gasseri}	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	lactobacillus helveticus {L. helveticus}	1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics	lactobacillus helveticus,lactobacillus rhamnosus	1 Studies recorded. The consensus is Decreases👶, Click for details.
Probiotics	Lactobacillus plantarum {L. plantarum}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Saccharomyces cerevisiae var boulardii {S. boulardii}	1 Studies recorded. The consensus is Increases📓, Click for details.
Probiotics	Streptococcus salivarius subsp. thermophilus {S. thermophilus}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Probiotics	Vsl#3 {Visibiome}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Sugar and similar	D-(-)-Fructose {Fruit sugar}	1 Studies recorded. The consensus is Decreases👶, Click for details.
Sugar and similar	ß-(1?4)-linked D-glucosamine and N-acetyl-D-glucosamine {Chitosan}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Sugar and similar	Sucralose {Splenda}	1 Studies recorded. The consensus is Decreases📓, Click for details.
Vitamins, Minerals and similar	(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol {Vitamin A}	1 Studies recorded. The consensus is Increases👶, Click for details.
Vitamins, Minerals and similar	vitamin d	2 Studies recorded. The consensus is Decreases📓, Click for details.
Vitamins, Minerals and similar	Zinc {Zinc Supplements}	1 Studies recorded. The consensus is Increases📓, Click for details.