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National Library of Medicine Citations for Polycystic ovary syndrome

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: Perplexity  Kagi Labs  You 

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Pseudomonadota   ⬆️ ⬆️    
Acidobacteriota   ⬆️    
Gammaproteobacteria   ⬆️    
Rodentibacter   ⬆️    
Acinetobacter     ⬇️  
Enterobacteriaceae   ⬆️    
Escherichia   ⬆️ ⬆️ ⬆️ ⬆️    
Shigella   ⬆️ ⬆️ ⬆️    
Burkholderia   ⬆️    
Sutterella   ⬆️    
Parasutterella   ⬆️    
Akkermansia     ⬇️ ⬇️  
Bacteroidota   ⬆️    
Bacteroidaceae   ⬆️   ⬇️  
Rikenellaceae     ⬇️  
Porphyromonadaceae     ⬇️  
Prevotellaceae   ⬆️   ⬇️  
Muribaculaceae     ⬇️  
Alistipes   ⬆️   ⬇️ ⬇️  
Porphyromonas   ⬆️ ⬆️ ⬆️    
Prevotella   ⬆️ ⬆️ ⬆️    
Paraprevotella   ⬆️    
Alloprevotella   ⬆️    
Odoribacter     ⬇️ ⬇️ ⬇️  
Parabacteroides   ⬆️ ⬆️    
Parabacteroides merdae   ⬆️    
Parabacteroides distasonis   ⬆️    
Bacteroides   ⬆️ ⬆️ ⬆️   ⬇️  
Bacteroides fragilis   ⬆️ ⬆️    
Phocaeicola vulgatus   ⬆️ ⬆️ ⬆️    
Phocaeicola coprophilus   ⬆️ ⬆️    
Mycoplasmatota   ⬆️   ⬇️  
Actinomycetota   ⬆️ ⬆️    
Bacillota   ⬆️   ⬇️  
Clostridia   ⬆️   ⬇️  
Anaerococcus     ⬇️  
Clostridiisalibacter     ⬇️  
Oscillospiraceae     ⬇️  
Clostridiaceae   ⬆️    
Eubacterium coprostanoligenes     ⬇️  
Faecalibacterium     ⬇️ ⬇️  
Oscillibacter   ⬆️    
Anaerofilum   ⬆️    
Ruminococcus   ⬆️ ⬆️   ⬇️  
Ruminiclostridium   ⬆️    
Dysosmobacter     ⬇️  
Ruminococcus bromii   ⬆️   ⬇️  
Faecalibacterium prausnitzii   ⬆️    
Butyricicoccus     ⬇️  
Clostridium   ⬆️ ⬆️   ⬇️  
Flintibacter     ⬇️  
Christensenellaceae     ⬇️  
Lachnospiraceae   ⬆️ ⬆️ ⬆️   ⬇️  
Blautia   ⬆️ ⬆️ ⬆️   ⬇️  
Coprococcus   ⬆️    
Roseburia   ⬆️ ⬆️   ⬇️ ⬇️ ⬇️  
Eisenbergiella   ⬆️    
Sellimonas     ⬇️  
Merdimonas     ⬇️  
Mediterraneibacter gnavus   ⬆️    
Blautia obeum   ⬆️    
Erysipelotrichaceae   ⬆️ ⬆️    
Holdemania     ⬇️  
Allobaculum   ⬆️    
Kandleria   ⬆️    
Catenibacterium   ⬆️    
Dialister     ⬇️  
Bacillales   ⬆️    
Planococcaceae   ⬆️    
Streptococcaceae   ⬆️    
Streptococcus   ⬆️ ⬆️   ⬇️  
Lactococcus   ⬆️    
Lactobacillus   ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Limosilactobacillus     ⬇️  
Enterococcus   ⬆️    
Actinomyces   ⬆️    
Bifidobacterium   ⬆️   ⬇️ ⬇️  
Gardnerella   ⬆️    
Gardnerella vaginalis   ⬆️    
Nocardiaceae   ⬆️    
Corynebacterium     ⬇️  
Enterorhabdus     ⬇️  
Mycoplasma   ⬆️ ⬆️    
Desulfobacter   ⬆️    
Desulfovibrio   ⬆️    
Bilophila     ⬇️  
Fusobacterium   ⬆️    
Ascomycota   ⬆️    
Basidiomycota     ⬇️  

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low n/a Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High n/a Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High n/a Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) Low n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) Low n/a Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) High n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    📚 PubMed
family Muribaculaceae (NCBI:2005473 ) Low n/a Distribution    📚 PubMed
family Nocardiaceae (NCBI:85025 ) High n/a Distribution    📚 PubMed
family Oscillospiraceae (NCBI:216572 ) Low n/a Distribution    📚 PubMed
family Planococcaceae (NCBI:186818 ) High n/a Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) Low n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) High n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) Low n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    📚 PubMed
family Streptococcaceae (NCBI:1300 ) High n/a Distribution    📚 PubMed
genus Acinetobacter (NCBI:469 ) Low n/a Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    📚 PubMed
genus Allobaculum (NCBI:174708 ) High n/a Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) High n/a Distribution    📚 PubMed
genus Anaerococcus (NCBI:165779 ) Low n/a Distribution    📚 PubMed
genus Anaerofilum (NCBI:52784 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) Low n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low n/a Distribution    📚 PubMed
genus Burkholderia (NCBI:32008 ) High n/a Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) Low n/a Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) High n/a Distribution    📚 PubMed
genus Clostridiisalibacter (NCBI:516086 ) Low n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) High n/a Distribution    📚 PubMed
genus Corynebacterium (NCBI:1716 ) Low n/a Distribution    📚 PubMed
genus Desulfobacter (NCBI:2289 ) High n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High n/a Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low n/a Distribution    📚 PubMed
genus Dysosmobacter (NCBI:2591381 ) Low n/a Distribution    📚 PubMed
genus Eisenbergiella (NCBI:1432051 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterorhabdus (NCBI:580024 ) Low n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Flintibacter (NCBI:1918454 ) Low n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Gardnerella (NCBI:2701 ) High n/a Distribution    📚 PubMed
genus Holdemania (NCBI:61170 ) Low n/a Distribution    📚 PubMed
genus Kandleria (NCBI:1279388 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactococcus (NCBI:1357 ) High n/a Distribution    📚 PubMed
genus Limosilactobacillus (NCBI:2742598 ) Low n/a Distribution    📚 PubMed
genus Merdimonas (NCBI:2023266 ) Low n/a Distribution    📚 PubMed
genus Mycoplasma (NCBI:2093 ) High n/a Distribution    📚 PubMed
genus Mycoplasma (NCBI:2093 ) High n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) High n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    📚 PubMed
genus Paraprevotella (NCBI:577309 ) High n/a Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Rodentibacter (NCBI:1960084 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Ruminiclostridium (NCBI:1508657 ) High n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Sellimonas (NCBI:1769710 ) Low n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
order Bacillales (NCBI:1385 ) High n/a Distribution    📚 PubMed
phylum Acidobacteriota (NCBI:57723 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Ascomycota (NCBI:4890 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) High n/a Distribution    📚 PubMed
phylum Basidiomycota (NCBI:5204 ) Low n/a Distribution    📚 PubMed
phylum Mycoplasmatota (NCBI:544448 ) High n/a Distribution    📚 PubMed
phylum Mycoplasmatota (NCBI:544448 ) Low n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Blautia obeum (NCBI:40520 ) High n/a Distribution    📚 PubMed
species Eubacterium coprostanoligenes (NCBI:290054 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) High n/a Distribution    📚 PubMed
species Gardnerella vaginalis (NCBI:2702 ) High n/a Distribution    📚 PubMed
species Mediterraneibacter gnavus (NCBI:33038 ) High n/a Distribution    📚 PubMed
species Parabacteroides distasonis (NCBI:823 ) High n/a Distribution    📚 PubMed
species Parabacteroides merdae (NCBI:46503 ) High n/a Distribution    📚 PubMed
species Phocaeicola coprophilus (NCBI:387090 ) High n/a Distribution    📚 PubMed
species Phocaeicola coprophilus (NCBI:387090 ) High n/a Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High n/a Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High n/a Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High n/a Distribution    📚 PubMed
species Ruminococcus bromii (NCBI:40518 ) High n/a Distribution    📚 PubMed
species Ruminococcus bromii (NCBI:40518 ) Low n/a Distribution    📚 PubMed

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