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National Library of Medicine Citations for Obesity

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: Perplexity  Kagi Labs  You 

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Lambdavirus     ⬇️  
Tunavirus   ⬆️   ⬇️  
Pseudomonadota   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Synergistota   ⬆️    
Gammaproteobacteria   ⬆️    
Pseudomonadales   ⬆️    
Succinatimonas   ⬆️   ⬇️  
Aggregatibacter   ⬆️ ⬆️    
Actinobacillus   ⬆️    
Haemophilus   ⬆️ ⬆️    
Haemophilus parainfluenzae     ⬇️  
Moraxella catarrhalis   ⬆️    
Pseudomonas aeruginosa   ⬆️    
Enterobacteriaceae   ⬆️ ⬆️ ⬆️    
Pantoea   ⬆️    
Morganella   ⬆️    
Proteus mirabilis   ⬆️    
Shigella   ⬆️    
Enterobacter   ⬆️    
Escherichia   ⬆️    
Kosakonia   ⬆️    
Klebsiella   ⬆️ ⬆️ ⬆️    
Klebsiella oxytoca   ⬆️    
Klebsiella pneumoniae   ⬆️ ⬆️   ⬇️  
Enterobacter cloacae   ⬆️    
Escherichia coli   ⬆️ ⬆️    
Burkholderiales   ⬆️    
Neisseria     ⬇️  
Burkholderiaceae   ⬆️    
Burkholderia   ⬆️    
Sutterella   ⬆️   ⬇️  
Parasutterella   ⬆️    
Sutterella sp.   ⬆️    
Verrucomicrobiota     ⬇️  
Akkermansiaceae   ⬆️   ⬇️  
Akkermansia   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Akkermansia muciniphila   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Akkermansia sp.     ⬇️  
Fibrobacterota   ⬆️   ⬇️  
Bacteroidota     ⬇️ ⬇️  
Bacteroidia     ⬇️ ⬇️  
Riemerella     ⬇️  
Flavobacterium     ⬇️  
Bacteroidaceae     ⬇️  
Rikenellaceae   ⬆️   ⬇️  
Porphyromonadaceae     ⬇️  
Prevotellaceae   ⬆️ ⬆️ ⬆️    
Muribaculaceae     ⬇️ ⬇️ ⬇️  
Paludibacteraceae     ⬇️  
Odoribacteraceae     ⬇️  
Alistipes   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Rikenella     ⬇️  
Alistipes inops   ⬆️    
Sanguibacteroides     ⬇️  
Porphyromonas     ⬇️  
Prevotella   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Alloprevotella     ⬇️  
Segatella copri   ⬆️    
Prevotella bivia     ⬇️  
Prevotella corporis   ⬆️    
Odoribacter   ⬆️ ⬆️   ⬇️  
Butyricimonas     ⬇️ ⬇️  
Odoribacter splanchnicus   ⬆️    
Muribaculum   ⬆️    
Barnesiella     ⬇️  
Parabacteroides   ⬆️ ⬆️   ⬇️  
Bacteroides   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Bacteroides fragilis     ⬇️  
Bacteroides caccae   ⬆️    
Bacteroides sp.     ⬇️  
Phocaeicola dorei   ⬆️    
Mycoplasmatota     ⬇️  
Actinomycetota   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Bacillota   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Clostridia     ⬇️ ⬇️  
Parvimonas   ⬆️   ⬇️  
Finegoldia magna   ⬆️    
Eubacteriales     ⬇️  
Oscillospiraceae     ⬇️ ⬇️  
Clostridiaceae     ⬇️ ⬇️  
Peptococcaceae     ⬇️  
Eubacterium   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️  
Eubacterium ventriosum   ⬆️   ⬇️  
Eubacterium sp.     ⬇️  
Oscillospira   ⬆️   ⬇️ ⬇️ ⬇️  
Faecalibacterium   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Ruminococcus   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Subdoligranulum   ⬆️   ⬇️  
Anaerotruncus   ⬆️   ⬇️  
Oscillibacter   ⬆️   ⬇️  
Angelakisella   ⬆️    
Flavonifractor   ⬆️    
Ruminiclostridium     ⬇️  
Ruminococcus bicirculans (ex Wegman et al. 2014)     ⬇️  
Ruminococcus sp.     ⬇️  
Ruminiclostridium sp.     ⬇️  
Faecalibacterium prausnitzii   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Faecalibacterium sp.     ⬇️  
Lawsonibacter asaccharolyticus   ⬆️    
Oscillibacter sp.     ⬇️  
Flavonifractor plautii   ⬆️    
Butyricicoccus   ⬆️ ⬆️   ⬇️ ⬇️  
Clostridium   ⬆️ ⬆️ ⬆️   ⬇️  
Clostridium sp.   ⬆️    
Clostridium sp. CAG:58   ⬆️    
Intestinimonas   ⬆️    
Colidextribacter     ⬇️  
Flintibacter   ⬆️    
Gemmiger     ⬇️  
Intestinibacter     ⬇️  
Romboutsia   ⬆️ ⬆️    
Peptostreptococcus sp.     ⬇️  
Romboutsia ilealis     ⬇️  
Alkaliphilus     ⬇️  
Peptoclostridium   ⬆️    
Christensenellaceae   ⬆️   ⬇️ ⬇️ ⬇️  
Christensenella     ⬇️  
Lachnospiraceae   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️  
Anaerostipes     ⬇️ ⬇️  
Dorea   ⬆️ ⬆️   ⬇️  
Coprococcus   ⬆️   ⬇️ ⬇️  
Lachnospira   ⬆️   ⬇️  
Roseburia   ⬆️   ⬇️  
Butyrivibrio   ⬆️   ⬇️  
Lachnoclostridium   ⬆️    
Fusicatenibacter   ⬆️    
Blautia   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️  
Oribacterium     ⬇️  
Tyzzerella sp.     ⬇️  
Dorea formicigenerans   ⬆️    
Mediterraneibacter gnavus   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
[Ruminococcus] torques   ⬆️    
Anaerobutyricum hallii     ⬇️  
Oribacterium asaccharolyticum     ⬇️  
Blautia wexlerae   ⬆️    
Blautia coccoides     ⬇️  
Roseburia hominis   ⬆️    
Roseburia sp. CAG:309     ⬇️  
Erysipelotrichaceae   ⬆️ ⬆️   ⬇️  
Solobacterium   ⬆️    
Allobaculum   ⬆️ ⬆️   ⬇️  
Holdemania   ⬆️ ⬆️    
Faecalitalea   ⬆️    
Faecalibaculum   ⬆️ ⬆️ ⬆️   ⬇️  
Catenibacterium   ⬆️    
Turicibacter   ⬆️   ⬇️  
Turicibacter sanguinis     ⬇️  
Firmicutes bacterium CAG:94   ⬆️    
Acidaminococcaceae     ⬇️  
Phascolarctobacterium     ⬇️  
Dialister     ⬇️  
Allisonella   ⬆️    
Veillonella rogosae   ⬆️    
Dialister succinatiphilus   ⬆️    
Selenomonadaceae   ⬆️    
Megamonas   ⬆️ ⬆️    
Centipeda     ⬇️  
Bacillus     ⬇️  
Bacillus sp. (in: firmicutes)     ⬇️  
Bacillus velezensis     ⬇️  
Paenibacillus     ⬇️  
Staphylococcus   ⬆️ ⬆️ ⬆️   ⬇️  
Lactobacillaceae     ⬇️  
Streptococcus   ⬆️   ⬇️  
Streptococcus salivarius     ⬇️  
Streptococcus pneumoniae   ⬆️    
Streptococcus dysgalactiae   ⬆️    
Lactobacillus   ⬆️ ⬆️ ⬆️   ⬇️  
Limosilactobacillus reuteri   ⬆️    
Lacticaseibacillus paracasei     ⬇️  
Lactiplantibacillus plantarum     ⬇️  
Latilactobacillus sakei     ⬇️  
uncultured Ligilactobacillus sp.   ⬆️    
Weissella cibaria     ⬇️  
Enterococcus faecium   ⬆️    
Actinomycetes   ⬆️    
Actinomycetes incertae sedis     ⬇️  
Actinomyces     ⬇️ ⬇️  
Actinomyces graevenitzii     ⬇️  
Actinobaculum massiliense     ⬇️  
Bifidobacteriaceae     ⬇️  
Bifidobacterium   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Bifidobacterium adolescentis     ⬇️  
Bifidobacterium bifidum     ⬇️  
Bifidobacterium breve   ⬆️    
Bifidobacterium animalis     ⬇️  
Bifidobacterium longum subsp. infantis   ⬆️    
Bifidobacterium longum subsp. longum     ⬇️  
Bifidobacterium animalis subsp. lactis     ⬇️  
Rothia dentocariosa     ⬇️  
Propionibacterium   ⬆️    
Slackia   ⬆️    
Eggerthella     ⬇️  
Adlercreutzia   ⬆️ ⬆️ ⬆️    
Gordonibacter   ⬆️    
Enterorhabdus   ⬆️   ⬇️  
Coriobacteriaceae   ⬆️ ⬆️    
Atopobium     ⬇️  
Collinsella   ⬆️ ⬆️   ⬇️  
Collinsella aerofaciens   ⬆️    
Mollicutes   ⬆️   ⬇️  
Deferribacteres   ⬆️    
Desulfovibrionales     ⬇️  
Desulfovibrionaceae   ⬆️ ⬆️    
Bilophila   ⬆️    
Desulfovibrio   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Helicobacter   ⬆️    
Helicobacter pylori   ⬆️    
Fusobacteriia   ⬆️    
Streptobacillus     ⬇️  
Fusobacterium   ⬆️   ⬇️  
Fusobacterium nucleatum     ⬇️  
Fusobacterium sp.     ⬇️  
Deltaproteobacteria     ⬇️  
Methanobrevibacter   ⬆️ ⬆️   ⬇️  
Methanosphaera   ⬆️    
Methanobrevibacter smithii     ⬇️ ⬇️ ⬇️  
Centipeda     ⬇️  
Rothia     ⬇️  
Bacillus     ⬇️  
Rhodotorula mucilaginosa     ⬇️  

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Actinomycetes (NCBI:1760 ) High n/a Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) Low n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low n/a Distribution    📚 PubMed
class Deferribacteres (NCBI:68337 ) High n/a Distribution    📚 PubMed
class Deltaproteobacteria (NCBI:28221 ) Low n/a Distribution    📚 PubMed
class Fusobacteriia (NCBI:203490 ) High n/a Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High n/a Distribution    📚 PubMed
class Mollicutes (NCBI:31969 ) High n/a Distribution    📚 PubMed
class Mollicutes (NCBI:31969 ) Low n/a Distribution    📚 PubMed
family Acidaminococcaceae (NCBI:909930 ) Low n/a Distribution    📚 PubMed
family Akkermansiaceae (NCBI:1647988 ) High n/a Distribution    📚 PubMed
family Akkermansiaceae (NCBI:1647988 ) Low n/a Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) Low n/a Distribution    📚 PubMed
family Bifidobacteriaceae (NCBI:31953 ) Low n/a Distribution    📚 PubMed
family Burkholderiaceae (NCBI:119060 ) High n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) High n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) Low n/a Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low n/a Distribution    📚 PubMed
family Coriobacteriaceae (NCBI:84107 ) High n/a Distribution    📚 PubMed
family Desulfovibrionaceae (NCBI:194924 ) High n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) Low n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) Low n/a Distribution    📚 PubMed
family Muribaculaceae (NCBI:2005473 ) Low n/a Distribution    📚 PubMed
family Odoribacteraceae (NCBI:1853231 ) Low n/a Distribution    📚 PubMed
family Oscillospiraceae (NCBI:216572 ) Low n/a Distribution    📚 PubMed
family Paludibacteraceae (NCBI:2005523 ) Low n/a Distribution    📚 PubMed
family Peptococcaceae (NCBI:186807 ) Low n/a Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) Low n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) High n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) High n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) Low n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    📚 PubMed
family Selenomonadaceae (NCBI:1843491 ) High n/a Distribution    📚 PubMed
genus Actinobacillus (NCBI:713 ) High n/a Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) Low n/a Distribution    📚 PubMed
genus Adlercreutzia (NCBI:447020 ) High n/a Distribution    📚 PubMed
genus Aggregatibacter (NCBI:416916 ) High n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) High n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    📚 PubMed
genus Alkaliphilus (NCBI:114627 ) Low n/a Distribution    📚 PubMed
genus Allisonella (NCBI:209879 ) High n/a Distribution    📚 PubMed
genus Allobaculum (NCBI:174708 ) High n/a Distribution    📚 PubMed
genus Allobaculum (NCBI:174708 ) Low n/a Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) Low n/a Distribution    📚 PubMed
genus Anaerostipes (NCBI:207244 ) Low n/a Distribution    📚 PubMed
genus Anaerotruncus (NCBI:244127 ) High n/a Distribution    📚 PubMed
genus Anaerotruncus (NCBI:244127 ) Low n/a Distribution    📚 PubMed
genus Angelakisella (NCBI:1935176 ) High n/a Distribution    📚 PubMed
genus Atopobium (NCBI:1380 ) Low n/a Distribution    📚 PubMed
genus Bacillus (NCBI:1386 ) Low n/a Distribution    📚 PubMed
genus Bacillus (NCBI:55087 ) Low n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Barnesiella (NCBI:397864 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Bilophila (NCBI:35832 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low n/a Distribution    📚 PubMed
genus Burkholderia (NCBI:32008 ) High n/a Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) High n/a Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) Low n/a Distribution    📚 PubMed
genus Butyricimonas (NCBI:574697 ) Low n/a Distribution    📚 PubMed
genus Butyrivibrio (NCBI:830 ) High n/a Distribution    📚 PubMed
genus Butyrivibrio (NCBI:830 ) Low n/a Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) High n/a Distribution    📚 PubMed
genus Centipeda (NCBI:82202 ) Low n/a Distribution    📚 PubMed
genus Centipeda (NCBI:82283 ) Low n/a Distribution    📚 PubMed
genus Christensenella (NCBI:990721 ) Low n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Colidextribacter (NCBI:1980681 ) Low n/a Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High n/a Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) Low n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) High n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) Low n/a Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low n/a Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) High n/a Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) Low n/a Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) Low n/a Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) High n/a Distribution    📚 PubMed
genus Enterorhabdus (NCBI:580024 ) High n/a Distribution    📚 PubMed
genus Enterorhabdus (NCBI:580024 ) Low n/a Distribution    📚 PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) Low n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) High n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibaculum (NCBI:1729679 ) High n/a Distribution    📚 PubMed
genus Faecalibaculum (NCBI:1729679 ) Low n/a Distribution    📚 PubMed
genus Faecalitalea (NCBI:1573534 ) High n/a Distribution    📚 PubMed
genus Flavobacterium (NCBI:237 ) Low n/a Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High n/a Distribution    📚 PubMed
genus Flintibacter (NCBI:1918454 ) High n/a Distribution    📚 PubMed
genus Fusicatenibacter (NCBI:1407607 ) High n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) Low n/a Distribution    📚 PubMed
genus Gemmiger (NCBI:204475 ) Low n/a Distribution    📚 PubMed
genus Gordonibacter (NCBI:644652 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) High n/a Distribution    📚 PubMed
genus Helicobacter (NCBI:209 ) High n/a Distribution    📚 PubMed
genus Holdemania (NCBI:61170 ) High n/a Distribution    📚 PubMed
genus Intestinibacter (NCBI:1505657 ) Low n/a Distribution    📚 PubMed
genus Intestinimonas (NCBI:1392389 ) High n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Kosakonia (NCBI:1330547 ) High n/a Distribution    📚 PubMed
genus Lachnoclostridium (NCBI:1506553 ) High n/a Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) High n/a Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lambdavirus (NCBI:186765 ) Low n/a Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) High n/a Distribution    📚 PubMed
genus Methanobrevibacter (NCBI:2172 ) High n/a Distribution    📚 PubMed
genus Methanobrevibacter (NCBI:2172 ) Low n/a Distribution    📚 PubMed
genus Methanosphaera (NCBI:2316 ) High n/a Distribution    📚 PubMed
genus Morganella (NCBI:581 ) High n/a Distribution    📚 PubMed
genus Muribaculum (NCBI:1918540 ) High n/a Distribution    📚 PubMed
genus Neisseria (NCBI:482 ) Low n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) High n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Oribacterium (NCBI:265975 ) Low n/a Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) High n/a Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) Low n/a Distribution    📚 PubMed
genus Oscillospira (NCBI:119852 ) High n/a Distribution    📚 PubMed
genus Oscillospira (NCBI:119852 ) Low n/a Distribution    📚 PubMed
genus Paenibacillus (NCBI:44249 ) Low n/a Distribution    📚 PubMed
genus Pantoea (NCBI:53335 ) High n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) Low n/a Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) High n/a Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) High n/a Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) Low n/a Distribution    📚 PubMed
genus Peptoclostridium (NCBI:1481960 ) High n/a Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) Low n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    📚 PubMed
genus Propionibacterium (NCBI:1743 ) High n/a Distribution    📚 PubMed
genus Riemerella (NCBI:34084 ) Low n/a Distribution    📚 PubMed
genus Rikenella (NCBI:28138 ) Low n/a Distribution    📚 PubMed
genus Romboutsia (NCBI:1501226 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Rothia (NCBI:508215 ) Low n/a Distribution    📚 PubMed
genus Ruminiclostridium (NCBI:1508657 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Sanguibacteroides (NCBI:1635148 ) Low n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) High n/a Distribution    📚 PubMed
genus Solobacterium (NCBI:123375 ) High n/a Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) Low n/a Distribution    📚 PubMed
genus Streptobacillus (NCBI:34104 ) Low n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low n/a Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) High n/a Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) Low n/a Distribution    📚 PubMed
genus Succinatimonas (NCBI:674963 ) High n/a Distribution    📚 PubMed
genus Succinatimonas (NCBI:674963 ) Low n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) Low n/a Distribution    📚 PubMed
genus Tunavirus (NCBI:187217 ) High n/a Distribution    📚 PubMed
genus Tunavirus (NCBI:187217 ) Low n/a Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) High n/a Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) Low n/a Distribution    📚 PubMed
no rank Actinomycetes incertae sedis (NCBI:1643818 ) Low n/a Distribution    📚 PubMed
order Burkholderiales (NCBI:80840 ) High n/a Distribution    📚 PubMed
order Desulfovibrionales (NCBI:213115 ) Low n/a Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) Low n/a Distribution    📚 PubMed
order Pseudomonadales (NCBI:72274 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) Low n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) Low n/a Distribution    📚 PubMed
phylum Fibrobacterota (NCBI:65842 ) High n/a Distribution    📚 PubMed
phylum Fibrobacterota (NCBI:65842 ) Low n/a Distribution    📚 PubMed
phylum Mycoplasmatota (NCBI:544448 ) Low n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Synergistota (NCBI:508458 ) High n/a Distribution    📚 PubMed
phylum Verrucomicrobiota (NCBI:74201 ) Low n/a Distribution    📚 PubMed
species [Ruminococcus] torques (NCBI:33039 ) High n/a Distribution    📚 PubMed
species Actinobaculum massiliense (NCBI:202789 ) Low n/a Distribution    📚 PubMed
species Actinomyces graevenitzii (NCBI:55565 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) High n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia sp. (NCBI:1872421 ) Low n/a Distribution    📚 PubMed
species Alistipes inops (NCBI:1501391 ) High n/a Distribution    📚 PubMed
species Alistipes obesi (NCBI:1118061 ) Low n/a Distribution    📚 PubMed
species Anaerobutyricum hallii (NCBI:39488 ) Low n/a Distribution    📚 PubMed
species Bacillus sp. (in: firmicutes) (NCBI:1409 ) Low n/a Distribution    📚 PubMed
species Bacillus velezensis (NCBI:492670 ) Low n/a Distribution    📚 PubMed
species Bacteroides caccae (NCBI:47678 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) Low n/a Distribution    📚 PubMed
species Bacteroides sp. (NCBI:29523 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium adolescentis (NCBI:1680 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium animalis (NCBI:28025 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium bifidum (NCBI:1681 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium breve (NCBI:1685 ) High n/a Distribution    📚 PubMed
species Blautia coccoides (NCBI:1532 ) Low n/a Distribution    📚 PubMed
species Blautia wexlerae (NCBI:418240 ) High n/a Distribution    📚 PubMed
species Clostridium sp. (NCBI:1506 ) High n/a Distribution    📚 PubMed
species Clostridium sp. CAG:58 (NCBI:1262824 ) High n/a Distribution    📚 PubMed
species Collinsella aerofaciens (NCBI:74426 ) High n/a Distribution    📚 PubMed
species Dialister succinatiphilus (NCBI:487173 ) High n/a Distribution    📚 PubMed
species Dorea formicigenerans (NCBI:39486 ) High n/a Distribution    📚 PubMed
species Enterobacter cloacae (NCBI:550 ) High n/a Distribution    📚 PubMed
species Enterococcus faecium (NCBI:1352 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Eubacterium sp. (NCBI:142586 ) Low n/a Distribution    📚 PubMed
species Eubacterium ventriosum (NCBI:39496 ) High n/a Distribution    📚 PubMed
species Eubacterium ventriosum (NCBI:39496 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) High n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium sp. (NCBI:1971605 ) Low n/a Distribution    📚 PubMed
species Finegoldia magna (NCBI:1260 ) High n/a Distribution    📚 PubMed
species Firmicutes bacterium CAG:94 (NCBI:1262989 ) High n/a Distribution    📚 PubMed
species Flavonifractor plautii (NCBI:292800 ) High n/a Distribution    📚 PubMed
species Fusobacterium nucleatum (NCBI:851 ) Low n/a Distribution    📚 PubMed
species Fusobacterium sp. (NCBI:68766 ) Low n/a Distribution    📚 PubMed
species Haemophilus parainfluenzae (NCBI:729 ) Low n/a Distribution    📚 PubMed
species Helicobacter pylori (NCBI:210 ) High n/a Distribution    📚 PubMed
species Klebsiella oxytoca (NCBI:571 ) High n/a Distribution    📚 PubMed
species Klebsiella pneumoniae (NCBI:573 ) High n/a Distribution    📚 PubMed
species Klebsiella pneumoniae (NCBI:573 ) Low n/a Distribution    📚 PubMed
species Lacticaseibacillus paracasei (NCBI:1597 ) Low n/a Distribution    📚 PubMed
species Lactiplantibacillus plantarum (NCBI:1590 ) Low n/a Distribution    📚 PubMed
species Latilactobacillus sakei (NCBI:1599 ) Low n/a Distribution    📚 PubMed
species Lawsonibacter asaccharolyticus (NCBI:2108523 ) High n/a Distribution    📚 PubMed
species Limosilactobacillus reuteri (NCBI:1598 ) High n/a Distribution    📚 PubMed
species Mediterraneibacter gnavus (NCBI:33038 ) High n/a Distribution    📚 PubMed
species Mediterraneibacter gnavus (NCBI:33038 ) Low n/a Distribution    📚 PubMed
species Methanobrevibacter smithii (NCBI:2173 ) Low n/a Distribution    📚 PubMed
species Moraxella catarrhalis (NCBI:480 ) High n/a Distribution    📚 PubMed
species Odoribacter splanchnicus (NCBI:28118 ) High n/a Distribution    📚 PubMed
species Oribacterium asaccharolyticum (NCBI:1501332 ) Low n/a Distribution    📚 PubMed
species Oscillibacter sp. (NCBI:1945593 ) Low n/a Distribution    📚 PubMed
species Peptostreptococcus sp. (NCBI:1262 ) Low n/a Distribution    📚 PubMed
species Phocaeicola dorei (NCBI:357276 ) High n/a Distribution    📚 PubMed
species Prevotella bivia (NCBI:28125 ) Low n/a Distribution    📚 PubMed
species Prevotella corporis (NCBI:28128 ) High n/a Distribution    📚 PubMed
species Proteus mirabilis (NCBI:584 ) High n/a Distribution    📚 PubMed
species Pseudomonas aeruginosa (NCBI:287 ) High n/a Distribution    📚 PubMed
species Rhodotorula mucilaginosa (NCBI:5537 ) Low n/a Distribution    📚 PubMed
species Romboutsia ilealis (NCBI:1115758 ) Low n/a Distribution    📚 PubMed
species Roseburia hominis (NCBI:301301 ) High n/a Distribution    📚 PubMed
species Roseburia sp. CAG:309 (NCBI:1262945 ) Low n/a Distribution    📚 PubMed
species Rothia dentocariosa (NCBI:2047 ) Low n/a Distribution    📚 PubMed
species Ruminiclostridium sp. (NCBI:2053608 ) Low n/a Distribution    📚 PubMed
species Ruminococcus bicirculans (ex Wegman et al. 2014) (NCBI:1160721 ) Low n/a Distribution    📚 PubMed
species Ruminococcus sp. (NCBI:41978 ) Low n/a Distribution    📚 PubMed
species Segatella copri (NCBI:165179 ) High n/a Distribution    📚 PubMed
species Streptococcus dysgalactiae (NCBI:1334 ) High n/a Distribution    📚 PubMed
species Streptococcus pneumoniae (NCBI:1313 ) High n/a Distribution    📚 PubMed
species Streptococcus salivarius (NCBI:1304 ) Low n/a Distribution    📚 PubMed
species Sutterella sp. (NCBI:1981025 ) High n/a Distribution    📚 PubMed
species Turicibacter sanguinis (NCBI:154288 ) Low n/a Distribution    📚 PubMed
species Tyzzerella sp. (NCBI:2053632 ) Low n/a Distribution    📚 PubMed
species uncultured Ligilactobacillus sp. (NCBI:2837633 ) High n/a Distribution    📚 PubMed
species Veillonella rogosae (NCBI:423477 ) High n/a Distribution    📚 PubMed
species Weissella cibaria (NCBI:137591 ) Low n/a Distribution    📚 PubMed
subspecies Bifidobacterium animalis subsp. lactis (NCBI:302911 ) Low n/a Distribution    📚 PubMed
subspecies Bifidobacterium longum subsp. infantis (NCBI:1682 ) High n/a Distribution    📚 PubMed
subspecies Bifidobacterium longum subsp. longum (NCBI:1679 ) Low n/a Distribution    📚 PubMed

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