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National Library of Medicine Citations for Inflammatory Bowel Disease

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: Perplexity  Kagi Labs  You 

Note these are associations and not causation. Items being high or low may be part of the immune response.

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⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Pseudomonadota   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Fusobacteriota   ⬆️ ⬆️    
Betaproteobacteria   ⬆️    
Haemophilus   ⬆️ ⬆️ ⬆️   ⬇️  
Pseudomonas   ⬆️ ⬆️    
Enterobacteriaceae   ⬆️ ⬆️    
Proteus   ⬆️    
Salmonella   ⬆️ ⬆️    
Shigella   ⬆️ ⬆️ ⬆️ ⬆️    
Enterobacter     ⬇️  
Escherichia   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Klebsiella   ⬆️ ⬆️ ⬆️    
Enterobacter hormaechei   ⬆️    
Escherichia coli   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Shigella flexneri   ⬆️    
Shigella sonnei   ⬆️    
Neisseria   ⬆️   ⬇️  
Oxalobacteraceae   ⬆️    
Sutterella   ⬆️ ⬆️    
Verrucomicrobiota   ⬆️ ⬆️   ⬇️  
Chlamydiaceae   ⬆️    
Chlamydia   ⬆️    
Akkermansia   ⬆️   ⬇️ ⬇️ ⬇️  
Akkermansia muciniphila     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Bacteroidota   ⬆️   ⬇️ ⬇️  
Flavobacterium     ⬇️  
Muribaculaceae     ⬇️  
Rikenellaceae   ⬆️    
Porphyromonadaceae   ⬆️    
Prevotellaceae     ⬇️ ⬇️  
Alistipes     ⬇️  
Alistipes putredinis     ⬇️  
Porphyromonas   ⬆️    
Porphyromonas gingivalis   ⬆️    
Prevotella   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Segatella copri     ⬇️  
Odoribacter     ⬇️  
Barnesiella     ⬇️  
Parabacteroides   ⬆️    
Parabacteroides distasonis     ⬇️  
Bacteroides   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Bacteroides fragilis   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Bacteroides ovatus   ⬆️    
Phocaeicola vulgatus   ⬆️    
Cytophagales   ⬆️    
Actinomycetota   ⬆️ ⬆️ ⬆️   ⬇️  
Bacillota   ⬆️ ⬆️   ⬇️ ⬇️ ⬇️  
Clostridia   ⬆️ ⬆️ ⬆️   ⬇️  
Eubacteriales     ⬇️  
Clostridiaceae     ⬇️  
Eubacterium   ⬆️   ⬇️  
Eubacterium ruminantium     ⬇️  
Eubacterium ventriosum     ⬇️  
Eubacterium xylanophilum     ⬇️  
Oscillospira     ⬇️  
Flavonifractor   ⬆️    
Subdoligranulum   ⬆️    
Faecalibacterium   ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Ruminococcus     ⬇️ ⬇️ ⬇️ ⬇️  
Ruminococcus bromii     ⬇️  
Faecalibacterium duncaniae   ⬆️    
Faecalibacterium prausnitzii     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
[Clostridium] leptum     ⬇️  
[Eubacterium] siraeum     ⬇️  
Butyricicoccus pullicaecorum     ⬇️  
Clostridium   ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Clostridium butyricum     ⬇️  
Clostridium perfringens   ⬆️ ⬆️    
Intestinimonas     ⬇️  
Candidatus Soleaferrea   ⬆️    
Fenollaria     ⬇️  
Gemmiger formicilis     ⬇️  
[Eubacterium] brachy   ⬆️    
Peptostreptococcaceae   ⬆️    
Romboutsia   ⬆️    
Intestinibacter   ⬆️    
Clostridioides difficile   ⬆️ ⬆️    
Christensenellaceae   ⬆️   ⬇️  
Lachnospiraceae     ⬇️ ⬇️  
Anaerostipes     ⬇️  
Fusicatenibacter   ⬆️   ⬇️  
Agathobacter     ⬇️  
Sellimonas   ⬆️    
Blautia     ⬇️  
Coprococcus     ⬇️ ⬇️  
Lachnospira     ⬇️  
Roseburia     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
[Clostridium] scindens   ⬆️    
[Clostridium] colinum     ⬇️  
Agathobacter rectalis     ⬇️ ⬇️  
Anaerostipes hadrus     ⬇️  
Mediterraneibacter gnavus   ⬆️ ⬆️    
Anaerobutyricum hallii     ⬇️  
Blautia obeum     ⬇️  
Roseburia intestinalis     ⬇️ ⬇️ ⬇️  
Roseburia hominis   ⬆️    
Faecalitalea   ⬆️    
[Clostridium] innocuum   ⬆️ ⬆️    
Thomasclavelia   ⬆️    
Catenibacterium   ⬆️    
Thomasclavelia saccharogumia   ⬆️    
Thomasclavelia ramosa   ⬆️ ⬆️    
Phascolarctobacterium     ⬇️  
Veillonella   ⬆️ ⬆️   ⬇️  
Veillonella atypica   ⬆️ ⬆️    
Veillonella dispar   ⬆️    
Gemella   ⬆️    
Staphylococcus   ⬆️    
Lactobacillaceae     ⬇️ ⬇️  
Lactococcus   ⬆️    
Streptococcus   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Streptococcus salivarius   ⬆️    
Streptococcus thermophilus     ⬇️  
Streptococcus gallolyticus   ⬆️    
Lactobacillus   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Lacticaseibacillus rhamnosus     ⬇️  
Enterococcus   ⬆️ ⬆️ ⬆️ ⬆️    
Enterococcus faecalis   ⬆️ ⬆️    
Cyanobacteriota     ⬇️  
Chloroflexia   ⬆️    
Actinomyces   ⬆️ ⬆️    
Actinomyces graevenitzii   ⬆️    
Bifidobacterium   ⬆️ ⬆️ ⬆️   ⬇️ ⬇️  
Bifidobacterium adolescentis     ⬇️  
Bifidobacterium longum     ⬇️  
Corynebacterium   ⬆️    
Eggerthella   ⬆️    
Adlercreutzia     ⬇️  
Adlercreutzia equolifaciens     ⬇️  
Adlercreutzia equolifaciens subsp. celatus     ⬇️  
Eggerthella lenta   ⬆️    
Collinsella   ⬆️    
Collinsella aerofaciens     ⬇️  
Mycoplasma   ⬆️    
Deferribacteres   ⬆️    
Desulfovibrionaceae   ⬆️    
Desulfovibrio   ⬆️    
Bilophila wadsworthia     ⬇️  
Desulfovibrio piger     ⬇️  
Helicobacter pylori   ⬆️    
Campylobacter   ⬆️    
Campylobacter concisus   ⬆️    
Campylobacter concisus 13826   ⬆️    
Fusobacterium   ⬆️ ⬆️   ⬇️ ⬇️  
Fusobacterium nucleatum   ⬆️    
Methanobrevibacter smithii     ⬇️  
Methanosphaera stadtmanae   ⬆️    
Plasmodium   ⬆️    

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Betaproteobacteria (NCBI:28216 ) High n/a Distribution    📚 PubMed
class Chloroflexia (NCBI:32061 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low n/a Distribution    📚 PubMed
class Deferribacteres (NCBI:68337 ) High n/a Distribution    📚 PubMed
family Chlamydiaceae (NCBI:809 ) High n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) High n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) Low n/a Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low n/a Distribution    📚 PubMed
family Desulfovibrionaceae (NCBI:194924 ) High n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) Low n/a Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) Low n/a Distribution    📚 PubMed
family Muribaculaceae (NCBI:2005473 ) Low n/a Distribution    📚 PubMed
family Oxalobacteraceae (NCBI:75682 ) High n/a Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) High n/a Distribution    📚 PubMed
family Porphyromonadaceae (NCBI:171551 ) High n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High n/a Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High n/a Distribution    📚 PubMed
genus Adlercreutzia (NCBI:447020 ) Low n/a Distribution    📚 PubMed
genus Agathobacter (NCBI:1766253 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) High n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    📚 PubMed
genus Anaerostipes (NCBI:207244 ) Low n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Barnesiella (NCBI:397864 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low n/a Distribution    📚 PubMed
genus Campylobacter (NCBI:194 ) High n/a Distribution    📚 PubMed
genus Candidatus Soleaferrea (NCBI:1470353 ) High n/a Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) High n/a Distribution    📚 PubMed
genus Chlamydia (NCBI:810 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low n/a Distribution    📚 PubMed
genus Corynebacterium (NCBI:1716 ) High n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High n/a Distribution    📚 PubMed
genus Eggerthella (NCBI:84111 ) High n/a Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) Low n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) High n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) High n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalitalea (NCBI:1573534 ) High n/a Distribution    📚 PubMed
genus Fenollaria (NCBI:1686313 ) Low n/a Distribution    📚 PubMed
genus Flavobacterium (NCBI:237 ) Low n/a Distribution    📚 PubMed
genus Flavonifractor (NCBI:946234 ) High n/a Distribution    📚 PubMed
genus Fusicatenibacter (NCBI:1407607 ) High n/a Distribution    📚 PubMed
genus Fusicatenibacter (NCBI:1407607 ) Low n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) Low n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) Low n/a Distribution    📚 PubMed
genus Gemella (NCBI:1378 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) Low n/a Distribution    📚 PubMed
genus Intestinibacter (NCBI:1505657 ) High n/a Distribution    📚 PubMed
genus Intestinimonas (NCBI:1392389 ) Low n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactococcus (NCBI:1357 ) High n/a Distribution    📚 PubMed
genus Mycoplasma (NCBI:2093 ) High n/a Distribution    📚 PubMed
genus Neisseria (NCBI:482 ) High n/a Distribution    📚 PubMed
genus Neisseria (NCBI:482 ) Low n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Oscillospira (NCBI:119852 ) Low n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) Low n/a Distribution    📚 PubMed
genus Plasmodium (NCBI:5820 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    📚 PubMed
genus Proteus (NCBI:583 ) High n/a Distribution    📚 PubMed
genus Pseudomonas (NCBI:286 ) High n/a Distribution    📚 PubMed
genus Pseudomonas (NCBI:286 ) High n/a Distribution    📚 PubMed
genus Romboutsia (NCBI:1501226 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Salmonella (NCBI:590 ) High n/a Distribution    📚 PubMed
genus Salmonella (NCBI:590 ) High n/a Distribution    📚 PubMed
genus Sellimonas (NCBI:1769710 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) Low n/a Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) High n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
genus Thomasclavelia (NCBI:3025755 ) High n/a Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) High n/a Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) High n/a Distribution    📚 PubMed
genus Veillonella (NCBI:29465 ) Low n/a Distribution    📚 PubMed
order Cytophagales (NCBI:768507 ) High n/a Distribution    📚 PubMed
order Eubacteriales (NCBI:186802 ) Low n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) Low n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) Low n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) High n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) Low n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) Low n/a Distribution    📚 PubMed
phylum Cyanobacteriota (NCBI:1117 ) Low n/a Distribution    📚 PubMed
phylum Fusobacteriota (NCBI:32066 ) High n/a Distribution    📚 PubMed
phylum Fusobacteriota (NCBI:32066 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
phylum Verrucomicrobiota (NCBI:74201 ) High n/a Distribution    📚 PubMed
phylum Verrucomicrobiota (NCBI:74201 ) High n/a Distribution    📚 PubMed
phylum Verrucomicrobiota (NCBI:74201 ) Low n/a Distribution    📚 PubMed
species [Clostridium] colinum (NCBI:36835 ) Low n/a Distribution    📚 PubMed
species [Clostridium] innocuum (NCBI:1522 ) High n/a Distribution    📚 PubMed
species [Clostridium] innocuum (NCBI:1522 ) High n/a Distribution    📚 PubMed
species [Clostridium] leptum (NCBI:1535 ) Low n/a Distribution    📚 PubMed
species [Clostridium] scindens (NCBI:29347 ) High n/a Distribution    📚 PubMed
species [Eubacterium] brachy (NCBI:35517 ) High n/a Distribution    📚 PubMed
species [Eubacterium] siraeum (NCBI:39492 ) Low n/a Distribution    📚 PubMed
species Actinomyces graevenitzii (NCBI:55565 ) High n/a Distribution    📚 PubMed
species Adlercreutzia equolifaciens (NCBI:446660 ) Low n/a Distribution    📚 PubMed
species Agathobacter rectalis (NCBI:39491 ) Low n/a Distribution    📚 PubMed
species Agathobacter rectalis (NCBI:39491 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Alistipes putredinis (NCBI:28117 ) Low n/a Distribution    📚 PubMed
species Anaerobutyricum hallii (NCBI:39488 ) Low n/a Distribution    📚 PubMed
species Anaerostipes hadrus (NCBI:649756 ) Low n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) Low n/a Distribution    📚 PubMed
species Bacteroides ovatus (NCBI:28116 ) High n/a Distribution    📚 PubMed
species Bifidobacterium adolescentis (NCBI:1680 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium longum (NCBI:216816 ) Low n/a Distribution    📚 PubMed
species Bilophila wadsworthia (NCBI:35833 ) Low n/a Distribution    📚 PubMed
species Blautia obeum (NCBI:40520 ) Low n/a Distribution    📚 PubMed
species Butyricicoccus pullicaecorum (NCBI:501571 ) Low n/a Distribution    📚 PubMed
species Campylobacter concisus (NCBI:199 ) High n/a Distribution    📚 PubMed
species Clostridioides difficile (NCBI:1496 ) High n/a Distribution    📚 PubMed
species Clostridioides difficile (NCBI:1496 ) High n/a Distribution    📚 PubMed
species Clostridium butyricum (NCBI:1492 ) Low n/a Distribution    📚 PubMed
species Clostridium perfringens (NCBI:1502 ) High n/a Distribution    📚 PubMed
species Clostridium perfringens (NCBI:1502 ) High n/a Distribution    📚 PubMed
species Collinsella aerofaciens (NCBI:74426 ) Low n/a Distribution    📚 PubMed
species Desulfovibrio piger (NCBI:901 ) Low n/a Distribution    📚 PubMed
species Eggerthella lenta (NCBI:84112 ) High n/a Distribution    📚 PubMed
species Enterobacter hormaechei (NCBI:158836 ) High n/a Distribution    📚 PubMed
species Enterococcus faecalis (NCBI:1351 ) High n/a Distribution    📚 PubMed
species Enterococcus faecalis (NCBI:1351 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) Low n/a Distribution    📚 PubMed
species Eubacterium ruminantium (NCBI:42322 ) Low n/a Distribution    📚 PubMed
species Eubacterium ventriosum (NCBI:39496 ) Low n/a Distribution    📚 PubMed
species Eubacterium xylanophilum (NCBI:39497 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium duncaniae (NCBI:411483 ) High n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Fusobacterium nucleatum (NCBI:851 ) High n/a Distribution    📚 PubMed
species Gemmiger formicilis (NCBI:745368 ) Low n/a Distribution    📚 PubMed
species Helicobacter pylori (NCBI:210 ) High n/a Distribution    📚 PubMed
species Lacticaseibacillus rhamnosus (NCBI:47715 ) Low n/a Distribution    📚 PubMed
species Mediterraneibacter gnavus (NCBI:33038 ) High n/a Distribution    📚 PubMed
species Mediterraneibacter gnavus (NCBI:33038 ) High n/a Distribution    📚 PubMed
species Methanobrevibacter smithii (NCBI:2173 ) Low n/a Distribution    📚 PubMed
species Methanosphaera stadtmanae (NCBI:2317 ) High n/a Distribution    📚 PubMed
species Parabacteroides distasonis (NCBI:823 ) Low n/a Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High n/a Distribution    📚 PubMed
species Porphyromonas gingivalis (NCBI:837 ) High n/a Distribution    📚 PubMed
species Roseburia hominis (NCBI:301301 ) High n/a Distribution    📚 PubMed
species Roseburia intestinalis (NCBI:166486 ) Low n/a Distribution    📚 PubMed
species Roseburia intestinalis (NCBI:166486 ) Low n/a Distribution    📚 PubMed
species Roseburia intestinalis (NCBI:166486 ) Low n/a Distribution    📚 PubMed
species Ruminococcus bromii (NCBI:40518 ) Low n/a Distribution    📚 PubMed
species Segatella copri (NCBI:165179 ) Low n/a Distribution    📚 PubMed
species Shigella flexneri (NCBI:623 ) High n/a Distribution    📚 PubMed
species Shigella sonnei (NCBI:624 ) High n/a Distribution    📚 PubMed
species Streptococcus gallolyticus (NCBI:315405 ) High n/a Distribution    📚 PubMed
species Streptococcus salivarius (NCBI:1304 ) High n/a Distribution    📚 PubMed
species Streptococcus thermophilus (NCBI:1308 ) Low n/a Distribution    📚 PubMed
species Thomasclavelia ramosa (NCBI:1547 ) High n/a Distribution    📚 PubMed
species Thomasclavelia ramosa (NCBI:1547 ) High n/a Distribution    📚 PubMed
species Thomasclavelia saccharogumia (NCBI:341225 ) High n/a Distribution    📚 PubMed
species Veillonella atypica (NCBI:39777 ) High n/a Distribution    📚 PubMed
species Veillonella atypica (NCBI:39777 ) High n/a Distribution    📚 PubMed
species Veillonella dispar (NCBI:39778 ) High n/a Distribution    📚 PubMed
strain Campylobacter concisus 13826 (NCBI:360104 ) High n/a Distribution    📚 PubMed
subspecies Adlercreutzia equolifaciens subsp. celatus (NCBI:394340 ) Low n/a Distribution    📚 PubMed

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