This site may require a log-in in the near future. We are constantly being swamped by AI agents. If they continue to take down the site, we will be changing to requiring logins to access any item.

National Library of Medicine Citations for Nonalcoholic Fatty Liver Disease (nafld) Nonalcoholic

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: Perplexity  Kagi Labs  You 

Note these are associations and not causation. Items being high or low may be part of the immune response.

You do not have any samples under this email

⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Pseudomonadota   ⬆️ ⬆️    
Fusobacteriota   ⬆️ ⬆️    
Gammaproteobacteria   ⬆️ ⬆️    
Pseudomonadales   ⬆️    
Enterobacterales   ⬆️    
Stenotrophomonas     ⬇️  
Succinivibrio   ⬆️    
Gallibacterium   ⬆️    
Enterobacteriaceae   ⬆️ ⬆️ ⬆️    
Proteus     ⬇️  
Shigella   ⬆️ ⬆️ ⬆️    
Citrobacter   ⬆️    
Enterobacter   ⬆️    
Escherichia   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Klebsiella   ⬆️    
Klebsiella pneumoniae   ⬆️    
Enterobacter cloacae   ⬆️    
Escherichia coli   ⬆️ ⬆️ ⬆️    
Sphingomonadales   ⬆️    
Sphingobium     ⬇️  
Caulobacter   ⬆️    
Bradyrhizobium   ⬆️    
Sutterella   ⬆️    
Parasutterella     ⬇️  
Victivallaceae     ⬇️  
Akkermansia     ⬇️ ⬇️ ⬇️  
Akkermansia muciniphila     ⬇️ ⬇️  
Fibrobacterota   ⬆️    
Bacteroidia     ⬇️  
Flavobacteriales   ⬆️    
Chryseobacterium   ⬆️    
Flavobacterium     ⬇️  
Rikenellaceae     ⬇️ ⬇️  
Prevotellaceae     ⬇️  
Muribaculaceae     ⬇️  
Alistipes   ⬆️ ⬆️   ⬇️ ⬇️  
Porphyromonas   ⬆️   ⬇️  
Porphyromonas gingivalis   ⬆️    
Porphyromonas bennonis     ⬇️  
Alloprevotella     ⬇️  
Prevotella   ⬆️ ⬆️ ⬆️ ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Segatella copri   ⬆️    
Hoylesella buccalis   ⬆️    
Odoribacter   ⬆️   ⬇️ ⬇️  
Barnesiella     ⬇️  
Bacteroides   ⬆️   ⬇️ ⬇️  
Bacteroides ovatus   ⬆️    
Actinomycetota   ⬆️    
Clostridia   ⬆️   ⬇️  
Anaerococcus   ⬆️    
Peptoniphilus   ⬆️    
Murdochiella   ⬆️    
Eubacterium   ⬆️   ⬇️ ⬇️ ⬇️  
Peptococcus   ⬆️    
Ruminococcus   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Oscillibacter     ⬇️  
Oscillospira     ⬇️ ⬇️ ⬇️  
Subdoligranulum     ⬇️ ⬇️  
Faecalibacterium     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Faecalibacterium prausnitzii     ⬇️  
[Clostridium] leptum     ⬇️  
Sarcina   ⬆️    
Clostridium   ⬆️    
Gemmiger   ⬆️   ⬇️  
Intestinimonas     ⬇️  
Colidextribacter   ⬆️    
Peptostreptococcaceae   ⬆️   ⬇️  
Romboutsia   ⬆️ ⬆️    
Terrisporobacter     ⬇️  
Mogibacterium     ⬇️  
Lachnospiraceae   ⬆️ ⬆️   ⬇️  
Dorea   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Tyzzerella     ⬇️  
Fusicatenibacter     ⬇️  
Acetatifactor   ⬆️   ⬇️  
Eisenbergiella     ⬇️  
Blautia   ⬆️ ⬆️   ⬇️ ⬇️  
Robinsoniella   ⬆️    
Lachnospira   ⬆️   ⬇️ ⬇️  
Coprococcus     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Roseburia   ⬆️   ⬇️  
[Clostridium] symbiosum   ⬆️    
Agathobacter rectalis     ⬇️ ⬇️  
Blautia obeum     ⬇️  
Blautia sp.     ⬇️  
Erysipelotrichaceae   ⬆️ ⬆️   ⬇️  
Allobaculum     ⬇️  
Ileibacterium   ⬆️    
Faecalibaculum   ⬆️   ⬇️  
Faecalitalea cylindroides     ⬇️  
Catenibacterium     ⬇️  
Thomasclavelia ramosa   ⬆️    
Turicibacter   ⬆️    
Veillonellaceae   ⬆️ ⬆️ ⬆️    
Mitsuokella   ⬆️    
Bacillaceae     ⬇️  
Lactobacillaceae   ⬆️ ⬆️    
Streptococcaceae   ⬆️    
Streptococcus   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Lactobacillus   ⬆️ ⬆️ ⬆️   ⬇️  
Limosilactobacillus vaginalis   ⬆️    
Limosilactobacillus mucosae   ⬆️    
Lacticaseibacillus zeae   ⬆️    
Levilactobacillus brevis   ⬆️    
Ligilactobacillus ruminis   ⬆️    
Enterococcus   ⬆️    
Enterococcus faecium   ⬆️    
Thermus   ⬆️    
Actinomycetales     ⬇️  
Mycobacteriales   ⬆️    
Gardnerella     ⬇️  
Bifidobacterium     ⬇️ ⬇️  
Bifidobacterium adolescentis     ⬇️  
Bifidobacterium bifidum     ⬇️  
Bifidobacterium longum     ⬇️  
Gardnerella vaginalis     ⬇️  
Lawsonella     ⬇️  
Rhodococcus   ⬆️    
Cutibacterium acnes   ⬆️    
Enterorhabdus     ⬇️  
Slackia   ⬆️   ⬇️  
Coriobacteriaceae     ⬇️  
Collinsella   ⬆️    
Mycoplasmoides pneumoniae   ⬆️    
Desulfovibrio   ⬆️ ⬆️    
Helicobacter   ⬆️    
Helicobacter pylori   ⬆️ ⬆️ ⬆️ ⬆️    
Fusobacteriia   ⬆️ ⬆️    
Fusobacterium   ⬆️    
Bosea   ⬆️    
Proteus     ⬇️  
Aspergillus     ⬇️  
Rhodotorula   ⬆️    

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Bacteroidia (NCBI:200643 ) Low n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) Low n/a Distribution    📚 PubMed
class Fusobacteriia (NCBI:203490 ) High n/a Distribution    📚 PubMed
class Gammaproteobacteria (NCBI:1236 ) High n/a Distribution    📚 PubMed
family Bacillaceae (NCBI:186817 ) Low n/a Distribution    📚 PubMed
family Coriobacteriaceae (NCBI:84107 ) Low n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) Low n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) Low n/a Distribution    📚 PubMed
family Lactobacillaceae (NCBI:33958 ) High n/a Distribution    📚 PubMed
family Muribaculaceae (NCBI:2005473 ) Low n/a Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) High n/a Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) Low n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) Low n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) Low n/a Distribution    📚 PubMed
family Streptococcaceae (NCBI:1300 ) High n/a Distribution    📚 PubMed
family Veillonellaceae (NCBI:31977 ) High n/a Distribution    📚 PubMed
family Victivallaceae (NCBI:255528 ) Low n/a Distribution    📚 PubMed
genus Acetatifactor (NCBI:1427378 ) High n/a Distribution    📚 PubMed
genus Acetatifactor (NCBI:1427378 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) Low n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) Low n/a Distribution    📚 PubMed
genus Allobaculum (NCBI:174708 ) Low n/a Distribution    📚 PubMed
genus Alloprevotella (NCBI:1283313 ) Low n/a Distribution    📚 PubMed
genus Anaerobacter (NCBI:69207 ) High n/a Distribution    📚 PubMed
genus Anaerococcus (NCBI:165779 ) High n/a Distribution    📚 PubMed
genus Aspergillus (NCBI:5052 ) Low n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Barnesiella (NCBI:397864 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) Low n/a Distribution    📚 PubMed
genus Bosea (NCBI:169215 ) High n/a Distribution    📚 PubMed
genus Bradyrhizobium (NCBI:374 ) High n/a Distribution    📚 PubMed
genus Candida (NCBI:1535326 ) High n/a Distribution    📚 PubMed
genus Catenibacterium (NCBI:135858 ) Low n/a Distribution    📚 PubMed
genus Caulobacter (NCBI:75 ) High n/a Distribution    📚 PubMed
genus Chryseobacterium (NCBI:59732 ) High n/a Distribution    📚 PubMed
genus Citrobacter (NCBI:544 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Colidextribacter (NCBI:1980681 ) High n/a Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) High n/a Distribution    📚 PubMed
genus Coprococcus (NCBI:33042 ) Low n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High n/a Distribution    📚 PubMed
genus Dorea (NCBI:189330 ) High n/a Distribution    📚 PubMed
genus Eisenbergiella (NCBI:1432051 ) Low n/a Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterorhabdus (NCBI:580024 ) Low n/a Distribution    📚 PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) High n/a Distribution    📚 PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) Low n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) Low n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Faecalibaculum (NCBI:1729679 ) High n/a Distribution    📚 PubMed
genus Faecalibaculum (NCBI:1729679 ) Low n/a Distribution    📚 PubMed
genus Flavobacterium (NCBI:237 ) Low n/a Distribution    📚 PubMed
genus Fusicatenibacter (NCBI:1407607 ) Low n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Gallibacterium (NCBI:155493 ) High n/a Distribution    📚 PubMed
genus Gardnerella (NCBI:2701 ) Low n/a Distribution    📚 PubMed
genus Gemmiger (NCBI:204475 ) High n/a Distribution    📚 PubMed
genus Gemmiger (NCBI:204475 ) Low n/a Distribution    📚 PubMed
genus Helicobacter (NCBI:209 ) High n/a Distribution    📚 PubMed
genus Ileibacterium (NCBI:1937007 ) High n/a Distribution    📚 PubMed
genus Intestinimonas (NCBI:1392389 ) Low n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) High n/a Distribution    📚 PubMed
genus Lachnospira (NCBI:28050 ) Low n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lawsonella (NCBI:1847725 ) Low n/a Distribution    📚 PubMed
genus Mitsuokella (NCBI:52225 ) High n/a Distribution    📚 PubMed
genus Mogibacterium (NCBI:86331 ) Low n/a Distribution    📚 PubMed
genus Murdochiella (NCBI:1161127 ) High n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) High n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) Low n/a Distribution    📚 PubMed
genus Oscillibacter (NCBI:459786 ) Low n/a Distribution    📚 PubMed
genus Oscillospira (NCBI:119852 ) Low n/a Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) Low n/a Distribution    📚 PubMed
genus Peptococcus (NCBI:2740 ) High n/a Distribution    📚 PubMed
genus Peptoniphilus (NCBI:162289 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) Low n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    📚 PubMed
genus Proteus (NCBI:583 ) Low n/a Distribution    📚 PubMed
genus Proteus (NCBI:210425 ) Low n/a Distribution    📚 PubMed
genus Rhodococcus (NCBI:1827 ) High n/a Distribution    📚 PubMed
genus Rhodotorula (NCBI:5533 ) High n/a Distribution    📚 PubMed
genus Robinsoniella (NCBI:588605 ) High n/a Distribution    📚 PubMed
genus Romboutsia (NCBI:1501226 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) Low n/a Distribution    📚 PubMed
genus Sarcina (NCBI:1266 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) High n/a Distribution    📚 PubMed
genus Slackia (NCBI:84108 ) Low n/a Distribution    📚 PubMed
genus Sphingobium (NCBI:165695 ) Low n/a Distribution    📚 PubMed
genus Stenotrophomonas (NCBI:40323 ) Low n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) Low n/a Distribution    📚 PubMed
genus Succinivibrio (NCBI:83770 ) High n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
genus Terrisporobacter (NCBI:1505652 ) Low n/a Distribution    📚 PubMed
genus Thermus (NCBI:270 ) High n/a Distribution    📚 PubMed
genus Turicibacter (NCBI:191303 ) High n/a Distribution    📚 PubMed
genus Tyzzerella (NCBI:1506577 ) Low n/a Distribution    📚 PubMed
order Actinomycetales (NCBI:2037 ) Low n/a Distribution    📚 PubMed
order Enterobacterales (NCBI:91347 ) High n/a Distribution    📚 PubMed
order Flavobacteriales (NCBI:200644 ) High n/a Distribution    📚 PubMed
order Mycobacteriales (NCBI:85007 ) High n/a Distribution    📚 PubMed
order Pseudomonadales (NCBI:72274 ) High n/a Distribution    📚 PubMed
order Sphingomonadales (NCBI:204457 ) High n/a Distribution    📚 PubMed
phylum Actinomycetota (NCBI:201174 ) High n/a Distribution    📚 PubMed
phylum Fibrobacterota (NCBI:65842 ) High n/a Distribution    📚 PubMed
phylum Fusobacteriota (NCBI:32066 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) High n/a Distribution    📚 PubMed
species [Clostridium] leptum (NCBI:1535 ) Low n/a Distribution    📚 PubMed
species [Clostridium] symbiosum (NCBI:1512 ) High n/a Distribution    📚 PubMed
species Agathobacter rectalis (NCBI:39491 ) Low n/a Distribution    📚 PubMed
species Akkermansia muciniphila (NCBI:239935 ) Low n/a Distribution    📚 PubMed
species Bacteroides ovatus (NCBI:28116 ) High n/a Distribution    📚 PubMed
species Bifidobacterium adolescentis (NCBI:1680 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium bifidum (NCBI:1681 ) Low n/a Distribution    📚 PubMed
species Bifidobacterium longum (NCBI:216816 ) Low n/a Distribution    📚 PubMed
species Blautia obeum (NCBI:40520 ) Low n/a Distribution    📚 PubMed
species Blautia sp. (NCBI:1955243 ) Low n/a Distribution    📚 PubMed
species Cutibacterium acnes (NCBI:1747 ) High n/a Distribution    📚 PubMed
species Enterobacter cloacae (NCBI:550 ) High n/a Distribution    📚 PubMed
species Enterococcus faecium (NCBI:1352 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Faecalibacterium prausnitzii (NCBI:853 ) Low n/a Distribution    📚 PubMed
species Faecalitalea cylindroides (NCBI:39483 ) Low n/a Distribution    📚 PubMed
species Gardnerella vaginalis (NCBI:2702 ) Low n/a Distribution    📚 PubMed
species Helicobacter pylori (NCBI:210 ) High n/a Distribution    📚 PubMed
species Hoylesella buccalis (NCBI:28127 ) High n/a Distribution    📚 PubMed
species Klebsiella pneumoniae (NCBI:573 ) High n/a Distribution    📚 PubMed
species Lacticaseibacillus zeae (NCBI:57037 ) High n/a Distribution    📚 PubMed
species Levilactobacillus brevis (NCBI:1580 ) High n/a Distribution    📚 PubMed
species Ligilactobacillus ruminis (NCBI:1623 ) High n/a Distribution    📚 PubMed
species Limosilactobacillus mucosae (NCBI:97478 ) High n/a Distribution    📚 PubMed
species Limosilactobacillus vaginalis (NCBI:1633 ) High n/a Distribution    📚 PubMed
species Mycoplasmoides pneumoniae (NCBI:2104 ) High n/a Distribution    📚 PubMed
species Porphyromonas bennonis (NCBI:501496 ) Low n/a Distribution    📚 PubMed
species Porphyromonas gingivalis (NCBI:837 ) High n/a Distribution    📚 PubMed
species Segatella copri (NCBI:165179 ) High n/a Distribution    📚 PubMed
species Thomasclavelia ramosa (NCBI:1547 ) High n/a Distribution    📚 PubMed

Explanations /Info /Descriptions are influenced by Large Language Models and may not be accurate and include some hallucinations.Please report any to us for correction.

Copyright 2016 - 2025 Lassesen Consulting, LLC[2007], DBA, Microbiome Prescription All rights served.   Permission to data scrap or reverse engineer is explicitly denied to all users.U.S.Code Title 18 PART I CHAPTER 47 § 1030, CETS No.185, CFAA   Use of data on this site is prohibited except under written license.There is no charge for individual personal use.Use for any commercial applications or research requires a written license.   Caveat emptor: Analysis and suggestions are based on modelling(and thus infererence ) based on studies.The data sources are usually given for those that wish to consider alternative inferences.theories and models.   Inventions /Methodologies on this site are Patent Pending.

Microbiome Prescription do not make any representations that data or analyses available on this site is suitable for human diagnostic purposes, for informing treatment decisions, or for any other purposes and accept no responsibility or liability whatsoever for such use.
This site is not in strict compliance with Personal Health Information Laws. [216.73.216 ]