National Library of Medicine Citations for Type 2 Diabetes
The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.
Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some
shifts are in opposite directions.
See this post about overlapping bacteria/taxa and possible progression of conditions.
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Note these are associations and not causation. Items being high or low may be part of the immune response.
⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.
Pseudomonadota
⬆️
⬆️
⬆️
⬆️
⬇️
Synergistota
⬆️
Gammaproteobacteria
⬆️
⬇️
Vibrio
⬆️
Succinatimonas
⬆️
⬇️
Haemophilus
⬇️
Enterobacteriaceae
⬆️
Pantoea
⬆️
Morganella
⬆️
Shigella
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Escherichia
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Klebsiella
⬆️
⬆️
⬆️
⬆️
⬆️
Klebsiella pneumoniae
⬆️
Escherichia coli
⬆️
⬆️
⬆️
⬇️
Rhodospirillales
⬆️
Comamonadaceae
⬆️
Oxalobacter
⬆️
Sutterella
⬆️
⬆️
⬆️
⬇️
⬇️
Parasutterella
⬇️
Mesosutterella
⬆️
Verrucomicrobiota
⬆️
⬇️
Verrucomicrobiales
⬆️
Verrucomicrobiaceae
⬆️
Akkermansia
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
Akkermansia muciniphila
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Fibrobacterota
⬆️
⬇️
Bacteroidota
⬇️
Bacteroidia
⬆️
⬇️
Prevotellaceae
⬆️
Odoribacteraceae
⬇️
Alistipes
⬆️
⬆️
⬇️
Porphyromonas
⬆️
Prevotella
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Paraprevotella
⬇️
⬇️
Alloprevotella
⬆️
Butyricimonas
⬆️
Odoribacter
⬆️
Barnesiella intestinihominis
⬇️
Parabacteroides
⬆️
⬇️
Bacteroides
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Phocaeicola
⬆️
Bacteroides fragilis
⬆️
⬆️
⬇️
Bacteroides thetaiotaomicron
⬇️
Bacteroides uniformis
⬇️
Bacteroides intestinalis
⬆️
Bacteroides stercoris
⬆️
Bacteroides caccae
⬆️
Phocaeicola vulgatus
⬆️
⬇️
Bacillota
⬆️
⬆️
⬆️
⬇️
⬇️
Mycoplasmatota
⬆️
Actinomycetota
⬆️
⬆️
⬆️
⬇️
Clostridia
⬆️
⬆️
⬇️
Negativicutes
⬆️
Peptoniphilus
⬆️
⬇️
Finegoldia
⬇️
Parvimonas
⬇️
Eubacteriales
⬆️
Clostridiaceae
⬇️
⬇️
Eubacterium
⬆️
⬇️
⬇️
Eubacterium oxidoreducens
⬇️
Eubacterium coprostanoligenes
⬆️
Peptococcus
⬇️
Ruminococcus
⬆️
⬆️
⬆️
⬆️
⬇️
Subdoligranulum
⬆️
⬆️
⬇️
Anaerotruncus
⬆️
Faecalibacterium
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Oscillibacter
⬇️
Oscillospira
⬆️
⬇️
Flavonifractor
⬆️
Pseudoflavonifractor
⬆️
Faecalibacterium prausnitzii
⬇️
⬇️
⬇️
⬇️
⬇️
[Clostridium] methylpentosum
⬆️
Butyricicoccus
⬆️
⬇️
Clostridium
⬇️
Clostridium butyricum
⬇️
Clostridium beijerinckii NCIMB 8052
⬇️
Clostridium beijerinckii NRRL B-598
⬇️
Gemmiger
⬆️
Peptostreptococcaceae
⬇️
⬇️
Lachnospiraceae
⬆️
Dorea
⬆️
⬆️
⬆️
⬇️
Anaerostipes
⬆️
⬇️
Oribacterium
⬇️
Blautia
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
Coprococcus
⬆️
⬇️
Butyrivibrio
⬆️
⬇️
⬇️
Roseburia
⬆️
⬇️
⬇️
⬇️
⬇️
Lachnoclostridium
⬆️
Agathobacter
⬆️
Sellimonas
⬇️
Mediterraneibacter gnavus
⬆️
⬆️
⬆️
Anaerobutyricum hallii DSM 3353
⬇️
Enterocloster bolteae
⬆️
Butyrivibrio crossotus
⬆️
Erysipelotrichaceae
⬆️
Solobacterium
⬆️
Holdemania
⬆️
Coprobacillus
⬆️
Catenibacterium
⬆️
⬇️
Turicibacter
⬇️
Phascolarctobacterium
⬆️
⬇️
Acidaminococcus
⬆️
⬆️
⬆️
Phascolarctobacterium faecium
⬇️
Veillonellaceae
⬆️
Veillonella
⬇️
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263244035
%ile
Dialister
⬇️
Megasphaera
⬆️
⬆️
⬆️
⬆️
Caecibacter
⬆️
Megamonas
⬆️
⬇️
Mitsuokella
⬆️
Paenibacillus
⬇️
Gemella
⬆️
⬇️
Staphylococcus
⬆️
⬇️
Streptococcus
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Lactococcus
⬆️
Lactobacillus
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Leuconostoc
⬇️
Pediococcus
⬇️
Weissella
⬆️
Lacticaseibacillus
⬇️
Ligilactobacillus
⬆️
Lactobacillus intestinalis
⬆️
Ligilactobacillus ruminis
⬆️
Enterococcus
⬆️
⬆️
Actinomycetes
⬆️
Actinomyces
⬆️
Bifidobacteriaceae
⬆️
Bifidobacterium
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Bifidobacterium adolescentis
⬇️
Bifidobacterium bifidum
⬆️
Bifidobacterium pseudolongum
⬇️
Bifidobacterium animalis
⬇️
Bifidobacterium longum subsp. infantis
⬇️
Rhodococcus
⬆️
Propionibacterium
⬇️
Slackia
⬆️
⬇️
Eggerthella
⬆️
Adlercreutzia
⬆️
Enterorhabdus
⬆️
Gordonibacter
⬆️
Coriobacteriaceae
⬆️
Collinsella
⬆️
⬆️
⬆️
Collinsella aerofaciens
⬆️
Bilophila
⬆️
⬆️
⬆️
Desulfovibrio
⬆️
⬆️
Campylobacter
⬆️
Fusobacterium
⬆️
⬆️
⬇️
Pyramidobacter
⬆️
Deltaproteobacteria
⬇️
Elusimicrobium
⬇️
Euryarchaeota
⬆️
Methanobrevibacter
⬆️
⬆️
⬇️
Methanosphaera
⬆️
⬇️
Blastocystis hominis
⬆️
Morganella
⬆️
Rhodococcus
⬆️
Malassezia
⬆️
Morganella
⬆️
To see matches for your sample with the literature, raise display level.
Based on Clinical Studies in US National Libary of Medicine
For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.
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