National Library of Medicine Citations for Autism
The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.
Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some
shifts are in opposite directions.
See this post about overlapping bacteria/taxa and possible progression of conditions.
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Note these are associations and not causation. Items being high or low may be part of the immune response.
⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.
Pseudomonadota
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⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
Fusobacteriota
⬇️
Acidobacteriota
⬆️
⬆️
Alphaproteobacteria
⬆️
Betaproteobacteria
⬆️
⬇️
Pasteurellaceae
⬆️
Actinobacillus
⬆️
⬆️
Haemophilus
⬆️
⬇️
⬇️
⬇️
Aggregatibacter
⬆️
Haemophilus parainfluenzae
⬇️
Moraxellaceae
⬆️
Acinetobacter
⬆️
Acinetobacter johnsonii
⬆️
Acinetobacter rhizosphaerae
⬆️
Pseudomonas
⬇️
Enterobacteriaceae
⬆️
⬆️
⬆️
⬆️
⬇️
Yersinia enterocolitica
⬆️
Proteus mirabilis
⬇️
Shigella
⬆️
⬆️
⬇️
⬇️
Citrobacter
⬆️
⬇️
Enterobacter
⬆️
⬆️
Escherichia
⬆️
⬇️
⬇️
Klebsiella
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⬆️
⬆️
⬇️
Klebsiella pneumoniae
⬆️
Enterobacter cloacae
⬇️
Escherichia coli
⬇️
Methylobacteriaceae
⬆️
Enhydrobacter
⬆️
Devosia
⬇️
Phyllobacterium
⬆️
Neisseria
⬆️
⬇️
Alcaligenaceae
⬆️
Sutterellaceae
⬆️
⬆️
Burkholderia
⬆️
⬆️
Ralstonia
⬆️
⬆️
⬇️
Sutterella
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Parasutterella
⬇️
⬇️
Verrucomicrobiota
⬇️
⬇️
Chlamydia
⬆️
Victivallales
⬆️
Akkermansia
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
Akkermansia muciniphila
⬆️
⬇️
⬇️
⬇️
⬇️
Coraliomargarita akajimensis
⬇️
Bacteroidota
⬆️
⬆️
⬆️
⬆️
⬇️
Bacteroidia
⬆️
Chryseobacterium
⬆️
Bacteroidales
⬇️
Rikenellaceae
⬆️
Prevotellaceae
⬆️
⬆️
⬆️
⬇️
⬇️
Bacteroidaceae
⬆️
Alistipes
⬆️
⬆️
⬇️
⬇️
⬇️
Alistipes putredinis
⬇️
Prevotella
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Paraprevotella
⬇️
⬇️
Segatella copri
⬆️
⬇️
Prevotella sp.
⬇️
Butyricimonas
⬆️
Odoribacter
⬆️
⬆️
⬇️
Barnesiella
⬆️
⬆️
⬆️
⬇️
⬇️
Coprobacter
⬆️
Parabacteroides
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Tannerella
⬇️
Parabacteroides distasonis
⬇️
Bacteroides
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Bacteroides fragilis
⬆️
⬇️
Bacteroides sp.
⬇️
Phocaeicola vulgatus
⬆️
⬆️
⬆️
⬆️
⬇️
Bacillota
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
Actinomycetota
⬆️
⬆️
⬆️
⬇️
⬇️
Mycoplasmatota
⬆️
Negativicutes
⬇️
Clostridia
⬆️
Bacilli
⬆️
Anaerococcus
⬆️
Ezakiella
⬇️
Eubacteriales
⬆️
⬆️
Eubacteriaceae
⬆️
Oscillospiraceae
⬆️
⬆️
Eubacterium
⬇️
⬇️
⬇️
⬇️
⬇️
Ruminococcus
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Oscillospira
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⬆️
⬆️
Ruminiclostridium
⬆️
Flavonifractor
⬆️
⬇️
⬇️
⬇️
Anaerotruncus
⬇️
Faecalibacterium
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
Ruminiclostridium cellulolyticum
⬆️
Faecalibacterium prausnitzii
⬇️
⬇️
⬇️
[Clostridium] leptum
⬇️
[Eubacterium] siraeum
⬇️
Butyricicoccus
⬇️
Butyricicoccus pullicaecorum
⬇️
Caloramator
⬆️
⬆️
Sarcina
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⬆️
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Clostridium
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⬆️
⬆️
⬇️
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Clostridium botulinum
⬆️
Clostridium perfringens
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Hathewaya histolytica
⬆️
⬆️
⬆️
Peptostreptococcus
⬆️
Romboutsia
⬇️
Intestinibacter
⬆️
Romboutsia ilealis
⬆️
Intestinibacter bartlettii
⬆️
Clostridioides difficile
⬆️
⬆️
Filifactor
⬆️
Lachnospiraceae
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Dorea
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
Anaerostipes
⬆️
⬇️
⬇️
Lachnospira
⬇️
⬇️
Coprococcus
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Roseburia
⬆️
⬆️
⬇️
⬇️
Moryella
⬇️
Eisenbergiella
⬇️
⬇️
Blautia
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
Lachnoclostridium
⬆️
⬆️
⬇️
Tyzzerella
⬇️
Lachnospiraceae incertae sedis
⬆️
Agathobacter rectalis
⬇️
Anaerostipes caccae
⬆️
Mediterraneibacter gnavus
⬆️
[Ruminococcus] torques
⬆️
⬆️
[Ruminococcus] lactaris
⬇️
Enterocloster bolteae
⬆️
⬆️
Enterocloster clostridioformis
⬆️
Lachnospira eligens
⬇️
⬇️
Erysipelotrichaceae
⬆️
⬆️
⬆️
⬇️
Faecalibaculum
⬇️
Holdemanella
⬆️
Catenibacterium
⬆️
Turicibacter
⬆️
⬆️
⬆️
⬇️
⬇️
Selenomonadales
⬇️
⬇️
Acidaminococcaceae
⬇️
Phascolarctobacterium
⬆️
⬆️
⬆️
⬆️
⬆️
Veillonellaceae
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
Veillonella
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Dialister
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Megasphaera
⬆️
⬆️
Dialister invisus
⬇️
⬇️
Megamonas
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
Amphibacillus
⬆️
Bacillus
⬆️
⬆️
Staphylococcus
⬆️
Lactobacillaceae
⬆️
Streptococcus
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Streptococcus pyogenes
⬆️
Lactobacillus
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Weissella
⬇️
Limosilactobacillus reuteri
⬇️
Lacticaseibacillus rhamnosus
⬇️
Lactiplantibacillus plantarum
⬇️
Enterococcus
⬇️
⬇️
Enterococcus faecalis
⬇️
Enterococcus gallinarum
⬇️
Deinococci
⬇️
Cyanobacteriota
⬆️
Bifidobacteriales
⬇️
Actinomyces
⬆️
⬆️
Bifidobacteriaceae
⬇️
⬇️
Bifidobacterium
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Bifidobacterium adolescentis
⬇️
Bifidobacterium longum
⬇️
⬇️
Corynebacterium
⬆️
⬆️
⬆️
Eggerthellaceae
⬇️
Eggerthella
⬆️
Adlercreutzia equolifaciens
⬆️
Eggerthella lenta
⬆️
Collinsella
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Mollicutes
⬇️
Mycoplasmoides pneumoniae
⬆️
Desulfovibrio
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Bilophila
⬇️
⬇️
⬇️
⬇️
Desulfovibrio intestinalis
⬆️
Desulfovibrio piger
⬆️
Spirochaeta thermophila
⬇️
Borrelia
⬆️
Campylobacter jejuni
⬇️
Fusobacteriia
⬇️
Leptotrichia
⬆️
Cetobacterium
⬆️
Fusobacterium
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Terriglobia
⬆️
⬆️
Holophagae
⬇️
Chloracidobacterium
⬇️
Chloracidobacterium thermophilum
⬇️
Rothia
⬆️
Bacillus
⬆️
⬆️
Candida
⬆️
⬆️
⬆️
Candida albicans
⬆️
Saccharomyces
⬆️
Aspergillus
⬆️
⬆️
To see matches for your sample with the literature, raise display level.
Based on Clinical Studies in US National Libary of Medicine
For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.
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