This site may require a log-in in the near future. We are constantly being swamped by AI agents. If they continue to take down the site, we will be changing to requiring logins to access any item.

National Library of Medicine Citations for Colorectal Cancer

The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.

Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some shifts are in opposite directions.

See this post about overlapping bacteria/taxa and possible progression of conditions.

AI Engines For more Details: Perplexity  Kagi Labs  You 

Note these are associations and not causation. Items being high or low may be part of the immune response.

You do not have any samples under this email

⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.

Pseudomonadota     ⬇️  
Fusobacteriota   ⬆️ ⬆️ ⬆️ ⬆️    
Stenotrophomonas   ⬆️    
Haemophilus     ⬇️  
Acinetobacter   ⬆️    
Pseudomonas   ⬆️ ⬆️    
Enterobacteriaceae   ⬆️ ⬆️ ⬆️ ⬆️    
Enterobacter   ⬆️    
Escherichia   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Shigella   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Klebsiella   ⬆️    
Escherichia coli   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Shigella flexneri   ⬆️    
Leclercia adecarboxylata   ⬆️    
Caulobacterales   ⬆️    
Sphingopyxis terrae   ⬆️    
Brevundimonas   ⬆️    
Neisseria   ⬆️    
Ralstonia   ⬆️ ⬆️    
Cupriavidus   ⬆️    
Herbaspirillum   ⬆️    
Acidovorax   ⬆️    
Sutterella   ⬆️    
Parasutterella   ⬆️    
Verrucomicrobiota   ⬆️    
Akkermansiaceae   ⬆️    
Akkermansia   ⬆️ ⬆️    
Bacteroidota   ⬆️ ⬆️    
Bacteroidia   ⬆️    
Rikenellaceae   ⬆️    
Prevotellaceae     ⬇️  
Muribaculaceae   ⬆️    
Bacteroidaceae   ⬆️   ⬇️  
Alistipes   ⬆️ ⬆️ ⬆️    
Alistipes putredinis   ⬆️    
Porphyromonas   ⬆️ ⬆️ ⬆️    
Porphyromonas asaccharolytica   ⬆️ ⬆️    
Prevotella   ⬆️   ⬇️  
Alloprevotella rava   ⬆️    
Prevotella intermedia   ⬆️ ⬆️    
Odoribacter   ⬆️    
Muribaculum   ⬆️    
Parabacteroides   ⬆️ ⬆️ ⬆️    
Phocaeicola   ⬆️   ⬇️  
Bacteroides   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️   ⬇️  
Bacteroides fragilis   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Phocaeicola vulgatus   ⬆️ ⬆️ ⬆️ ⬆️    
Bacillota   ⬆️    
Clostridia   ⬆️    
Bacilli   ⬆️    
Tissierellales   ⬆️    
Parvimonas   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Finegoldia magna   ⬆️    
Peptoniphilus indolicus   ⬆️    
Anaerococcus vaginalis   ⬆️    
Parvimonas micra   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Parvimonas sp.   ⬆️    
Oscillospiraceae   ⬆️    
Clostridiaceae     ⬇️  
Eubacterium   ⬆️    
Eubacterium ventriosum     ⬇️  
Faecalibacterium     ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Subdoligranulum   ⬆️    
Ruminococcus   ⬆️ ⬆️    
Butyricicoccus     ⬇️  
Clostridium   ⬆️   ⬇️  
Clostridium septicum   ⬆️    
Peptostreptococcaceae   ⬆️    
Romboutsia     ⬇️  
Peptostreptococcus   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Peptostreptococcus anaerobius   ⬆️ ⬆️ ⬆️ ⬆️    
Peptostreptococcus stomatis   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Christensenellaceae   ⬆️    
Lachnospiraceae   ⬆️ ⬆️    
Anaerostipes     ⬇️  
Blautia   ⬆️    
Lachnoclostridium   ⬆️    
Agathobacter     ⬇️  
Mediterraneibacter   ⬆️    
Roseburia   ⬆️   ⬇️ ⬇️  
[Clostridium] symbiosum   ⬆️    
Hungatella hathewayi   ⬆️ ⬆️    
Lachnospiraceae bacterium   ⬆️    
Blautia stercoris   ⬆️    
Erysipelotrichaceae   ⬆️   ⬇️  
Solobacterium moorei   ⬆️ ⬆️    
Phascolarctobacterium   ⬆️    
Megasphaera   ⬆️    
Dialister   ⬆️ ⬆️ ⬆️   ⬇️  
Dialister pneumosintes   ⬆️    
Megamonas   ⬆️    
Lactobacillales   ⬆️    
Gemellaceae   ⬆️ ⬆️    
Bacillus   ⬆️    
Listeria   ⬆️    
Gemella   ⬆️ ⬆️    
Gemella morbillorum   ⬆️ ⬆️    
Staphylococcus   ⬆️    
Streptococcus   ⬆️ ⬆️    
Lactococcus   ⬆️    
Streptococcus salivarius   ⬆️    
Streptococcus parasanguinis   ⬆️    
Streptococcus gallolyticus   ⬆️ ⬆️    
Streptococcus dysgalactiae   ⬆️    
Streptococcus anginosus   ⬆️    
Aerococcus   ⬆️    
Lactobacillus   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️  
Ligilactobacillus   ⬆️    
Lactobacillus gasseri   ⬆️    
Limosilactobacillus mucosae   ⬆️    
Enterococcus   ⬆️ ⬆️ ⬆️   ⬇️  
Cyanobacteriota   ⬆️    
Coriobacteriia     ⬇️  
Actinomyces   ⬆️    
Bifidobacterium   ⬆️   ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️ ⬇️  
Promicromonospora   ⬆️    
Corynebacterium   ⬆️    
Corynebacterium amycolatum   ⬆️    
Coriobacteriales     ⬇️  
Collinsella     ⬇️  
Mollicutes   ⬆️    
Desulfobacter     ⬇️  
Desulfovibrio   ⬆️   ⬇️  
Helicobacter pylori   ⬆️    
Campylobacter   ⬆️ ⬆️ ⬆️ ⬆️    
Campylobacter jejuni   ⬆️    
Campylobacter gracilis   ⬆️    
Fusobacteriia   ⬆️ ⬆️    
Leptotrichia   ⬆️    
Fusobacterium   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Fusobacterium nucleatum   ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️ ⬆️    
Euryarchaeota   ⬆️    
Methanomassiliicoccales     ⬇️  
Cryptosporidium   ⬆️    
Blastocystis hominis   ⬆️    

To see matches for your sample with the literature, raise display level.

Based on Clinical Studies in US National Libary of Medicine

For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.

Reference Data
Tax Rank Tax Name Shift Percentile Distribution Citation Link
class Bacilli (NCBI:91061 ) High n/a Distribution    📚 PubMed
class Bacteroidia (NCBI:200643 ) High n/a Distribution    📚 PubMed
class Clostridia (NCBI:186801 ) High n/a Distribution    📚 PubMed
class Coriobacteriia (NCBI:84998 ) Low n/a Distribution    📚 PubMed
class Fusobacteriia (NCBI:203490 ) High n/a Distribution    📚 PubMed
class Mollicutes (NCBI:31969 ) High n/a Distribution    📚 PubMed
family Akkermansiaceae (NCBI:1647988 ) High n/a Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) High n/a Distribution    📚 PubMed
family Bacteroidaceae (NCBI:815 ) Low n/a Distribution    📚 PubMed
family Christensenellaceae (NCBI:990719 ) High n/a Distribution    📚 PubMed
family Clostridiaceae (NCBI:31979 ) Low n/a Distribution    📚 PubMed
family Enterobacteriaceae (NCBI:543 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) High n/a Distribution    📚 PubMed
family Erysipelotrichaceae (NCBI:128827 ) Low n/a Distribution    📚 PubMed
family Gemellaceae (NCBI:539738 ) High n/a Distribution    📚 PubMed
family Lachnospiraceae (NCBI:186803 ) High n/a Distribution    📚 PubMed
family Muribaculaceae (NCBI:2005473 ) High n/a Distribution    📚 PubMed
family Oscillospiraceae (NCBI:216572 ) High n/a Distribution    📚 PubMed
family Peptostreptococcaceae (NCBI:186804 ) High n/a Distribution    📚 PubMed
family Prevotellaceae (NCBI:171552 ) Low n/a Distribution    📚 PubMed
family Rikenellaceae (NCBI:171550 ) High n/a Distribution    📚 PubMed
family Ruminococcaceae (NCBI:541000 ) High n/a Distribution    📚 PubMed
genus Acidovorax (NCBI:12916 ) High n/a Distribution    📚 PubMed
genus Acinetobacter (NCBI:469 ) High n/a Distribution    📚 PubMed
genus Actinomyces (NCBI:1654 ) High n/a Distribution    📚 PubMed
genus Aerococcus (NCBI:1375 ) High n/a Distribution    📚 PubMed
genus Agathobacter (NCBI:1766253 ) Low n/a Distribution    📚 PubMed
genus Akkermansia (NCBI:239934 ) High n/a Distribution    📚 PubMed
genus Alistipes (NCBI:239759 ) High n/a Distribution    📚 PubMed
genus Anaerostipes (NCBI:207244 ) Low n/a Distribution    📚 PubMed
genus Bacillus (NCBI:1386 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) High n/a Distribution    📚 PubMed
genus Bacteroides (NCBI:816 ) Low n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) High n/a Distribution    📚 PubMed
genus Bifidobacterium (NCBI:1678 ) Low n/a Distribution    📚 PubMed
genus Blautia (NCBI:572511 ) High n/a Distribution    📚 PubMed
genus Brevundimonas (NCBI:41275 ) High n/a Distribution    📚 PubMed
genus Butyricicoccus (NCBI:580596 ) Low n/a Distribution    📚 PubMed
genus Campylobacter (NCBI:194 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) High n/a Distribution    📚 PubMed
genus Clostridium (NCBI:1485 ) Low n/a Distribution    📚 PubMed
genus Collinsella (NCBI:102106 ) Low n/a Distribution    📚 PubMed
genus Corynebacterium (NCBI:1716 ) High n/a Distribution    📚 PubMed
genus Cryptosporidium (NCBI:5806 ) High n/a Distribution    📚 PubMed
genus Cupriavidus (NCBI:106589 ) High n/a Distribution    📚 PubMed
genus Desulfobacter (NCBI:2289 ) Low n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) High n/a Distribution    📚 PubMed
genus Desulfovibrio (NCBI:872 ) Low n/a Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) High n/a Distribution    📚 PubMed
genus Dialister (NCBI:39948 ) Low n/a Distribution    📚 PubMed
genus Enterobacter (NCBI:547 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) High n/a Distribution    📚 PubMed
genus Enterococcus (NCBI:1350 ) Low n/a Distribution    📚 PubMed
genus Erysipelatoclostridium (NCBI:1505663 ) High n/a Distribution    📚 PubMed
genus Escherichia (NCBI:561 ) High n/a Distribution    📚 PubMed
genus Eubacterium (NCBI:1730 ) High n/a Distribution    📚 PubMed
genus Faecalibacterium (NCBI:216851 ) Low n/a Distribution    📚 PubMed
genus Fusobacterium (NCBI:848 ) High n/a Distribution    📚 PubMed
genus Gemella (NCBI:1378 ) High n/a Distribution    📚 PubMed
genus Haemophilus (NCBI:724 ) Low n/a Distribution    📚 PubMed
genus Herbaspirillum (NCBI:963 ) High n/a Distribution    📚 PubMed
genus Klebsiella (NCBI:570 ) High n/a Distribution    📚 PubMed
genus Lachnoclostridium (NCBI:1506553 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) High n/a Distribution    📚 PubMed
genus Lactobacillus (NCBI:1578 ) Low n/a Distribution    📚 PubMed
genus Lactococcus (NCBI:1357 ) High n/a Distribution    📚 PubMed
genus Leptotrichia (NCBI:32067 ) High n/a Distribution    📚 PubMed
genus Ligilactobacillus (NCBI:2767887 ) High n/a Distribution    📚 PubMed
genus Listeria (NCBI:1637 ) High n/a Distribution    📚 PubMed
genus Mediterraneibacter (NCBI:2316020 ) High n/a Distribution    📚 PubMed
genus Megamonas (NCBI:158846 ) High n/a Distribution    📚 PubMed
genus Megasphaera (NCBI:906 ) High n/a Distribution    📚 PubMed
genus Muribaculum (NCBI:1918540 ) High n/a Distribution    📚 PubMed
genus Neisseria (NCBI:482 ) High n/a Distribution    📚 PubMed
genus Odoribacter (NCBI:283168 ) High n/a Distribution    📚 PubMed
genus Parabacteroides (NCBI:375288 ) High n/a Distribution    📚 PubMed
genus Parasutterella (NCBI:577310 ) High n/a Distribution    📚 PubMed
genus Parvimonas (NCBI:543311 ) High n/a Distribution    📚 PubMed
genus Peptostreptococcus (NCBI:1257 ) High n/a Distribution    📚 PubMed
genus Phascolarctobacterium (NCBI:33024 ) High n/a Distribution    📚 PubMed
genus Phocaeicola (NCBI:909656 ) High n/a Distribution    📚 PubMed
genus Phocaeicola (NCBI:909656 ) Low n/a Distribution    📚 PubMed
genus Porphyromonas (NCBI:836 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) High n/a Distribution    📚 PubMed
genus Prevotella (NCBI:838 ) Low n/a Distribution    📚 PubMed
genus Promicromonospora (NCBI:43676 ) High n/a Distribution    📚 PubMed
genus Pseudomonas (NCBI:286 ) High n/a Distribution    📚 PubMed
genus Ralstonia (NCBI:48736 ) High n/a Distribution    📚 PubMed
genus Romboutsia (NCBI:1501226 ) Low n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) High n/a Distribution    📚 PubMed
genus Roseburia (NCBI:841 ) Low n/a Distribution    📚 PubMed
genus Ruminococcus (NCBI:1263 ) High n/a Distribution    📚 PubMed
genus Shigella (NCBI:620 ) High n/a Distribution    📚 PubMed
genus Staphylococcus (NCBI:1279 ) High n/a Distribution    📚 PubMed
genus Stenotrophomonas (NCBI:40323 ) High n/a Distribution    📚 PubMed
genus Streptococcus (NCBI:1301 ) High n/a Distribution    📚 PubMed
genus Subdoligranulum (NCBI:292632 ) High n/a Distribution    📚 PubMed
genus Sutterella (NCBI:40544 ) High n/a Distribution    📚 PubMed
order Caulobacterales (NCBI:204458 ) High n/a Distribution    📚 PubMed
order Coriobacteriales (NCBI:84999 ) Low n/a Distribution    📚 PubMed
order Lactobacillales (NCBI:186826 ) High n/a Distribution    📚 PubMed
order Methanomassiliicoccales (NCBI:1235850 ) Low n/a Distribution    📚 PubMed
order Tissierellales (NCBI:1737405 ) High n/a Distribution    📚 PubMed
phylum Bacillota (NCBI:1239 ) High n/a Distribution    📚 PubMed
phylum Bacteroidota (NCBI:976 ) High n/a Distribution    📚 PubMed
phylum Cyanobacteriota (NCBI:1117 ) High n/a Distribution    📚 PubMed
phylum Euryarchaeota (NCBI:28890 ) High n/a Distribution    📚 PubMed
phylum Fusobacteriota (NCBI:32066 ) High n/a Distribution    📚 PubMed
phylum Pseudomonadota (NCBI:1224 ) Low n/a Distribution    📚 PubMed
phylum Verrucomicrobiota (NCBI:74201 ) High n/a Distribution    📚 PubMed
species [Clostridium] symbiosum (NCBI:1512 ) High n/a Distribution    📚 PubMed
species Alistipes putredinis (NCBI:28117 ) High n/a Distribution    📚 PubMed
species Alloprevotella rava (NCBI:671218 ) High n/a Distribution    📚 PubMed
species Anaerococcus vaginalis (NCBI:33037 ) High n/a Distribution    📚 PubMed
species Bacteroides fragilis (NCBI:817 ) High n/a Distribution    📚 PubMed
species Bacteroides sp (NCBI:2778071 ) Low n/a Distribution    📚 PubMed
species Blastocystis hominis (NCBI:12968 ) High n/a Distribution    📚 PubMed
species Blautia stercoris (NCBI:871664 ) High n/a Distribution    📚 PubMed
species Campylobacter gracilis (NCBI:824 ) High n/a Distribution    📚 PubMed
species Campylobacter jejuni (NCBI:197 ) High n/a Distribution    📚 PubMed
species Clostridium septicum (NCBI:1504 ) High n/a Distribution    📚 PubMed
species Corynebacterium amycolatum (NCBI:43765 ) High n/a Distribution    📚 PubMed
species Dialister pneumosintes (NCBI:39950 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) High n/a Distribution    📚 PubMed
species Escherichia coli (NCBI:562 ) Low n/a Distribution    📚 PubMed
species Eubacterium ventriosum (NCBI:39496 ) Low n/a Distribution    📚 PubMed
species Finegoldia magna (NCBI:1260 ) High n/a Distribution    📚 PubMed
species Fusobacterium nucleatum (NCBI:851 ) High n/a Distribution    📚 PubMed
species Gemella morbillorum (NCBI:29391 ) High n/a Distribution    📚 PubMed
species Helicobacter pylori (NCBI:210 ) High n/a Distribution    📚 PubMed
species Hungatella hathewayi (NCBI:154046 ) High n/a Distribution    📚 PubMed
species Lachnospiraceae bacterium (NCBI:1898203 ) High n/a Distribution    📚 PubMed
species Lactobacillus gasseri (NCBI:1596 ) High n/a Distribution    📚 PubMed
species Leclercia adecarboxylata (NCBI:83655 ) High n/a Distribution    📚 PubMed
species Limosilactobacillus mucosae (NCBI:97478 ) High n/a Distribution    📚 PubMed
species Parvimonas micra (NCBI:33033 ) High n/a Distribution    📚 PubMed
species Parvimonas sp. (NCBI:1944660 ) High n/a Distribution    📚 PubMed
species Peptoniphilus indolicus (NCBI:33030 ) High n/a Distribution    📚 PubMed
species Peptostreptococcus anaerobius (NCBI:1261 ) High n/a Distribution    📚 PubMed
species Peptostreptococcus stomatis (NCBI:341694 ) High n/a Distribution    📚 PubMed
species Phocaeicola vulgatus (NCBI:821 ) High n/a Distribution    📚 PubMed
species Porphyromonas asaccharolytica (NCBI:28123 ) High n/a Distribution    📚 PubMed
species Prevotella intermedia (NCBI:28131 ) High n/a Distribution    📚 PubMed
species Shigella flexneri (NCBI:623 ) High n/a Distribution    📚 PubMed
species Solobacterium moorei (NCBI:102148 ) High n/a Distribution    📚 PubMed
species Sphingopyxis terrae (NCBI:33052 ) High n/a Distribution    📚 PubMed
species Streptococcus anginosus (NCBI:1328 ) High n/a Distribution    📚 PubMed
species Streptococcus dysgalactiae (NCBI:1334 ) High n/a Distribution    📚 PubMed
species Streptococcus gallolyticus (NCBI:315405 ) High n/a Distribution    📚 PubMed
species Streptococcus parasanguinis (NCBI:1318 ) High n/a Distribution    📚 PubMed
species Streptococcus salivarius (NCBI:1304 ) High n/a Distribution    📚 PubMed

Explanations /Info /Descriptions are influenced by Large Language Models and may not be accurate and include some hallucinations.Please report any to us for correction.

Copyright 2016 - 2025 Lassesen Consulting, LLC[2007], DBA, Microbiome Prescription All rights served.   Permission to data scrap or reverse engineer is explicitly denied to all users.U.S.Code Title 18 PART I CHAPTER 47 § 1030, CETS No.185, CFAA   Use of data on this site is prohibited except under written license.There is no charge for individual personal use.Use for any commercial applications or research requires a written license.   Caveat emptor: Analysis and suggestions are based on modelling(and thus infererence ) based on studies.The data sources are usually given for those that wish to consider alternative inferences.theories and models.   Inventions /Methodologies on this site are Patent Pending.

Microbiome Prescription do not make any representations that data or analyses available on this site is suitable for human diagnostic purposes, for informing treatment decisions, or for any other purposes and accept no responsibility or liability whatsoever for such use.
This site is not in strict compliance with Personal Health Information Laws. [216.73.216 ]