National Library of Medicine Citations for Ulcerative colitis
The following have had published studies. These are report on the averages of a group of patients; they do not apply to all patients and are not necessary predictive.
Some studies were done on people with specific conditions, ethnic origin or diet style (i.e. traditional Chinese Diet versus Western Diet), which may be why some
shifts are in opposite directions.
See this post about overlapping bacteria/taxa and possible progression of conditions.
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Note these are associations and not causation. Items being high or low may be part of the immune response.
⬆️ indicate a study reporting it is high. ⬇️ indicates a study reporting it is low. Names are indented according to taxonomy rank. Hover over to see rank.
Pseudomonadota
⬆️
⬆️
⬆️
Gammaproteobacteria
⬆️
⬆️
Enterobacterales
⬆️
⬆️
Aeromonas
⬆️
Haemophilus
⬆️
⬆️
⬆️
Acinetobacter
⬆️
Francisella tularensis
⬆️
Pseudomonas
⬇️
Enterobacteriaceae
⬆️
⬆️
⬆️
Pantoea
⬆️
Yersinia
⬇️
Morganella
⬆️
Proteus mirabilis
⬆️
Shigella
⬆️
⬆️
⬆️
⬆️
Citrobacter
⬆️
⬇️
Enterobacter
⬇️
Escherichia
⬆️
⬆️
⬆️
⬆️
Cedecea
⬆️
Klebsiella
⬆️
Escherichia coli
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
Brevundimonas
⬇️
Candidatus Pelagibacter
⬆️
Neisseria
⬆️
Bordetella
⬆️
Oxalobacter
⬇️
Massilia
⬆️
Sutterella wadsworthensis
⬆️
Verrucomicrobiota
⬇️
Victivallis
⬇️
Akkermansia
⬇️
⬇️
⬇️
⬇️
Akkermansia muciniphila
⬇️
⬇️
⬇️
⬇️
Bacteroidota
⬇️
⬇️
⬇️
Bacteroidia
⬆️
⬇️
⬇️
⬇️
Bacteroidales
⬇️
⬇️
Rikenellaceae
⬆️
⬆️
Prevotellaceae
⬇️
⬇️
Bacteroidaceae
⬇️
Muribaculaceae
⬆️
Alistipes
⬆️
Alistipes putredinis
⬇️
Porphyromonas
⬆️
Porphyromonas asaccharolytica
⬇️
Prevotella
⬆️
⬆️
⬇️
Alloprevotella
⬇️
Segatella copri
⬇️
Odoribacter
⬇️
⬇️
⬇️
Butyricimonas
⬇️
⬇️
Coprobacter
⬆️
⬇️
Parabacteroides
⬆️
⬇️
⬇️
⬇️
Bacteroides
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
⬇️
Bacteroides fragilis
⬆️
⬇️
Bacteroides thetaiotaomicron
⬇️
Bacteroides uniformis
⬇️
Bacteroides ovatus
⬇️
Bacteroides acidifaciens
⬆️
⬆️
Phocaeicola vulgatus
⬆️
⬇️
⬇️
Bacillota
⬆️
⬇️
Actinomycetota
⬆️
⬆️
Clostridia
⬆️
⬇️
⬇️
Bacilli
⬆️
⬆️
Negativicutes
⬇️
Parvimonas
⬇️
Finegoldia
⬆️
Peptoniphilus
⬆️
⬆️
Eubacteriales
⬇️
Eubacterium ventriosum
⬇️
Dehalobacterium
⬇️
Anaerofilum
⬆️
Oscillospira
⬇️
Oscillibacter
⬆️
Subdoligranulum
⬆️
Faecalibacterium
⬆️
⬇️
⬇️
Anaerotruncus
⬆️
Ruminococcus
⬇️
⬇️
Flavonifractor
⬆️
⬆️
Angelakisella
⬇️
Faecalibacterium prausnitzii
⬆️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
⬇️
Butyricicoccus
⬇️
Clostridium
⬆️
⬆️
⬇️
⬇️
⬇️
⬇️
Clostridium butyricum
⬇️
⬇️
Clostridium perfringens
⬆️
Gemmiger
⬇️
[Eubacterium] brachy
⬆️
Peptostreptococcus
⬆️
⬆️
⬆️
Romboutsia
⬆️
⬇️
Intestinibacter
⬆️
Peptostreptococcus anaerobius
⬆️
Clostridioides difficile
⬇️
Christensenellaceae
⬇️
⬇️
Lachnospiraceae
⬆️
⬇️
⬇️
⬇️
Anaerostipes
⬆️
Dorea
⬆️
Oribacterium
⬆️
Coprococcus
⬇️
⬇️
⬇️
Lachnospira
⬆️
Roseburia
⬇️
⬇️
Butyrivibrio
⬆️
⬇️
Fusicatenibacter
⬇️
Eisenbergiella
⬆️
Blautia
⬆️
Sellimonas
⬆️
Fusicatenibacter saccharivorans
⬇️
Blautia producta
⬇️
Roseburia hominis
⬇️
Negativibacillus
⬆️
Faecalitalea
⬆️
Solobacterium
⬆️
[Clostridium] innocuum
⬆️
⬆️
Coprobacillus
⬆️
Catenibacterium
⬇️
Thomasclavelia ramosa
⬆️
Turicibacter
⬆️
Phascolarctobacterium
⬇️
Phascolarctobacterium succinatutens
⬆️
Dialister
⬇️
Veillonella
⬆️
⬆️
⬆️
⬆️
⬆️
🧪
263244035
%ile
Megamonas
⬇️
Lactobacillales
⬆️
⬆️
Gemellaceae
⬆️
Bacillus
⬆️
Gemella
⬆️
⬆️
Staphylococcus
⬆️
Streptococcaceae
⬆️
Lactobacillaceae
⬆️
Enterococcaceae
⬆️
Streptococcus
⬆️
⬆️
⬆️
Lactococcus
⬆️
⬆️
⬆️
Streptococcus gallolyticus
⬆️
Granulicatella
⬆️
⬆️
Weissella
⬆️
Lactobacillus
⬆️
⬆️
⬆️
⬇️
Leuconostoc
⬆️
⬇️
Lacticaseibacillus
⬆️
⬆️
Lactobacillus johnsonii
⬆️
⬇️
Lactobacillus intestinalis
⬇️
Lactiplantibacillus plantarum
⬇️
Latilactobacillus sakei
⬇️
Enterococcus
⬆️
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
Enterococcus faecalis
⬆️
Enterococcus faecium
⬆️
Actinomycetes
⬆️
⬆️
Coriobacteriia
⬇️
Bifidobacteriales
⬆️
Actinomyces
⬆️
⬆️
Bifidobacteriaceae
⬆️
Bifidobacterium
⬆️
⬆️
⬆️
⬆️
⬆️
⬇️
⬇️
Bifidobacterium bifidum
⬇️
Bifidobacterium animalis
⬇️
Rothia
⬆️
Corynebacterium
⬆️
⬇️
Cutibacterium
⬆️
Coriobacteriales
⬆️
Eggerthella
⬆️
Adlercreutzia
⬇️
Gordonibacter
⬆️
⬆️
Enterorhabdus
⬆️
Adlercreutzia equolifaciens
⬇️
Olsenella
⬆️
Atopobium
⬆️
Mucispirillum schaedleri
⬆️
Bilophila
⬇️
⬇️
Desulfovibrio
⬆️
⬇️
⬇️
Helicobacter pylori
⬆️
⬆️
Campylobacter concisus
⬆️
Cetobacterium
⬆️
Fusobacterium nucleatum
⬆️
⬆️
⬆️
Methanomassiliicoccales
⬇️
Methanobrevibacter
⬆️
⬇️
⬇️
⬇️
Methanosphaera
⬇️
Rothia
⬆️
Bacillus
⬆️
Morganella
⬆️
Saccharomyces cerevisiae
⬆️
Morganella
⬆️
To see matches for your sample with the literature, raise display level.
Based on Clinical Studies in US National Libary of Medicine
For matching a percentile below 20% can be deemed to be low, and above 80% as high. These are arbitrary thresholds. In some cases, like for d-acidosis, it is the total from all bacteria that is important.
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